RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 DCDC2CA8MYV0 355 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 FBXO24O75426 580 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 MAPK8P45983 427 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 ANGEL2Q5VTE6 544 aaKnown RBP8.13□□□□□ -1.11
CSDE1-210ENST00000525878 LLGL2Q6P1M3 1020 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 SLC23A3Q6PIS1 610 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 ZSCAN29Q8IWY8 852 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-210ENST00000525878 SPACA3Q8IXA5 215 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 WWC3Q9ULE0 1092 aa8.13□□□□□ -1.11
CSDE1-210ENST00000525878 EOMESO95936 686 aa8.12□□□□□ -1.11
CSDE1-210ENST00000525878 ITIH2P19823 946 aa8.12□□□□□ -1.11
CSDE1-210ENST00000525878 LRRC14Q15048 493 aa8.12□□□□□ -1.11
CSDE1-210ENST00000525878 NKPD1Q17RQ9 610 aa8.12□□□□□ -1.11
CSDE1-210ENST00000525878 CYP8B1Q9UNU6 501 aa8.12□□□□□ -1.11
CSDE1-210ENST00000525878 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
CSDE1-210ENST00000525878 TMEM40Q8WWA1 233 aa8.11□□□□□ -1.11
CSDE1-210ENST00000525878 FAM168AQ92567 244 aa8.11□□□□□ -1.11
CSDE1-210ENST00000525878 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
CSDE1-210ENST00000525878 CELA3AP09093 270 aa8.1□□□□□ -1.11
CSDE1-210ENST00000525878 KCT2Q8NC54 265 aa8.1□□□□□ -1.11
CSDE1-210ENST00000525878 ASB11Q8WXH4 323 aa8.1□□□□□ -1.11
CSDE1-210ENST00000525878 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
CSDE1-210ENST00000525878 LRIG2O94898 1065 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 PTPN11Q06124 597 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-210ENST00000525878 INPP5AQ14642 412 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 ZNF648Q5T619 568 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-210ENST00000525878 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 CYFIP1Q7L576 1253 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 SPG7Q9UQ90 795 aa8.09□□□□□ -1.11
CSDE1-210ENST00000525878 CLCN7P51798 805 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 LCE1DQ5T752 114 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 LRFN4Q6PJG9 635 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 ZNF507Q8TCN5 953 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 GAL3ST3Q96A11 431 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 IVNS1ABPQ9Y6Y0 642 aa8.08□□□□□ -1.12
CSDE1-210ENST00000525878 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
CSDE1-210ENST00000525878 SLITRK5O94991 958 aa8.07□□□□□ -1.12
CSDE1-210ENST00000525878 USP17L7P0C7H9 530 aa8.07□□□□□ -1.12
CSDE1-210ENST00000525878 CAP2P40123 477 aa8.07□□□□□ -1.12
CSDE1-210ENST00000525878 PICK1Q9NRD5 415 aa8.07□□□□□ -1.12
CSDE1-210ENST00000525878 P4HBP07237 508 aaKnown RBP8.06□□□□□ -1.12
CSDE1-210ENST00000525878 ATP2B2Q01814 1243 aa8.06□□□□□ -1.12
CSDE1-210ENST00000525878 SLBPQ14493 270 aaKnown RBP eCLIP8.06□□□□□ -1.12
CSDE1-210ENST00000525878 C22orf34Q6ZV56 151 aa8.06□□□□□ -1.12
CSDE1-210ENST00000525878 SV2BQ7L1I2 683 aa8.06□□□□□ -1.12
CSDE1-210ENST00000525878 ELMO3Q96BJ8 720 aa8.06□□□□□ -1.12
CSDE1-210ENST00000525878 FBRSQ9HAH7 460 aa8.06□□□□□ -1.12
CSDE1-210ENST00000525878 PRDM7Q9NQW5 492 aa8.06□□□□□ -1.12
CSDE1-210ENST00000525878 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-210ENST00000525878 CNTNAP4Q9C0A0 1308 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 FARP2O94887 1054 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-210ENST00000525878 ZP2Q05996 745 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 KCNA1Q09470 495 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 IKZF1Q13422 519 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 PLPPR2Q96GM1 343 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 FRMD6Q96NE9 622 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 WNT10AQ9GZT5 417 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 LMCD1Q9NZU5 365 aa8.05□□□□□ -1.12
CSDE1-210ENST00000525878 ZNF865P0CJ78 1059 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-210ENST00000525878 MESP2Q0VG99 397 aa8.04□□□□□ -1.12
CSDE1-210ENST00000525878 SEMA3GQ9NS98 782 aa8.04□□□□□ -1.12
CSDE1-210ENST00000525878 CTNND2Q9UQB3 1225 aa8.04□□□□□ -1.12
CSDE1-210ENST00000525878 SNCAIPQ9Y6H5 919 aa8.04□□□□□ -1.12
CSDE1-210ENST00000525878 NKG7Q16617 165 aa8.03□□□□□ -1.12
CSDE1-210ENST00000525878 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-210ENST00000525878 HDXQ7Z353 690 aa8.03□□□□□ -1.12
CSDE1-210ENST00000525878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.03□□□□□ -1.127e-7■□□□□ 9.9
CSDE1-210ENST00000525878 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
CSDE1-210ENST00000525878 ZNF503-AS2A6NEH8 195 aa8.02□□□□□ -1.13
CSDE1-210ENST00000525878 PRR33A8MZF0 331 aa8.02□□□□□ -1.13
CSDE1-210ENST00000525878 ZNF124Q15973 351 aa8.02□□□□□ -1.13
CSDE1-210ENST00000525878 ZSWIM9Q86XI8 627 aa8.02□□□□□ -1.13
CSDE1-210ENST00000525878 MFSD2AQ8NA29 543 aa8.02□□□□□ -1.13
CSDE1-210ENST00000525878 DBX1A6NMT0 343 aa8.01□□□□□ -1.13
CSDE1-210ENST00000525878 LDHBP07195 334 aaKnown RBP8.01□□□□□ -1.13
CSDE1-210ENST00000525878 CDK8P49336 464 aa8.01□□□□□ -1.13
CSDE1-210ENST00000525878 RPS26P62854 115 aaKnown RBP8.01□□□□□ -1.13
CSDE1-210ENST00000525878 TTBK2Q6IQ55 1244 aa8.01□□□□□ -1.13
CSDE1-210ENST00000525878 HSPA12BQ96MM6 686 aa8.01□□□□□ -1.13
CSDE1-210ENST00000525878 TTF2Q9UNY4 1162 aaKnown RBP8.01□□□□□ -1.13
CSDE1-210ENST00000525878 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8□□□□□ -1.13
CSDE1-210ENST00000525878 GFRA2O00451 464 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 GNA15P30679 374 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 WIPI1Q5MNZ9 446 aaPredicted RBP8□□□□□ -1.13
CSDE1-210ENST00000525878 SFRP5Q5T4F7 317 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 HID1Q8IV36 788 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 BHLHE22Q8NFJ8 381 aaPredicted RBP8□□□□□ -1.13
CSDE1-210ENST00000525878 RIN3Q8TB24 985 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 TIMELESSQ9UNS1 1208 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 ST14Q9Y5Y6 855 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 TACC3Q9Y6A5 838 aa8□□□□□ -1.13
CSDE1-210ENST00000525878 CAPN6Q9Y6Q1 641 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms