RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 USP6NLQ92738 828 aa9.2□□□□□ -0.94
RPUSD4-202ENST00000525812 DDX4Q9NQI0 724 aaKnown RBP9.2□□□□□ -0.94
RPUSD4-202ENST00000525812 HERC5Q9UII4 1024 aaKnown RBP9.2□□□□□ -0.94
RPUSD4-202ENST00000525812 USP17L5A8MUK1 530 aa9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 C19orf81C9J6K1 198 aa9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 MAGEA10P43363 369 aaPredicted RBP9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 ALDH1L2Q3SY69 923 aa9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 TREML2Q5T2D2 321 aa9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 LHX8Q68G74 356 aa9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 ASCC2Q9H1I8 757 aaPredicted RBP9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 C11orf49Q9H6J7 331 aa9.19□□□□□ -0.94
RPUSD4-202ENST00000525812 MROH7-TTC4A0A0A0MT08 1334 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 TRIM75PA6NK02 468 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 ECM2O94769 699 aaPredicted RBP9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 BACE1P56817 501 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 RASGRF1Q13972 1273 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 FOXP4Q8IVH2 680 aaPredicted RBP9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 ZNF384Q8TF68 577 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 SOCS4Q8WXH5 440 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 TRIB2Q92519 343 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 DHX36Q9H2U1 1008 aaKnown RBP9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 AS3MTQ9HBK9 375 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 MRS2Q9HD23 443 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 PI4KBQ9UBF8 816 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 AKAP2Q9Y2D5 859 aa9.18□□□□□ -0.94
RPUSD4-202ENST00000525812 PFASO15067 1338 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 IGHA2P01877 340 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 ASNSP08243 561 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 MAPK4P31152 587 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 BTDP43251 543 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 PPP4CP60510 307 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 GSTO1P78417 241 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 MTX1Q13505 466 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 MORN1Q5T089 497 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 DZIP1Q86YF9 867 aaKnown RBP9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 C7orf61Q8IZ16 206 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 SSH1Q8WYL5 1049 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 UBE2OQ9C0C9 1292 aaKnown RBP9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 PTPRFP10586 1907 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
RPUSD4-202ENST00000525812 UNC80Q8N2C7 3258 aa9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 AK9Q5TCS8 1911 aa9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 E9PSI1 815 aa9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 CT47B1P0C2W7 299 aaPredicted RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 HMGCS2P54868 508 aa9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 TIMM10P62072 90 aa9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 MECOMQ03112 1051 aa9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 CACNB2Q08289 660 aaPredicted RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 RRP1BQ14684 758 aaKnown RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 MVPQ14764 893 aaKnown RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 TRMT2AQ8IZ69 625 aaKnown RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 NSUN4Q96CB9 384 aaKnown RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 P2RX7Q99572 595 aaKnown RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
RPUSD4-202ENST00000525812 ALPK3Q96L96 1907 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 LAMA2P24043 3122 aaKnown RBP9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 MSCO60682 206 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 HOXC6P09630 235 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 UBTFL1P0CB47 393 aaPredicted RBP9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 SLURP2P0DP57 97 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 HERVK_113P62684 666 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 TRIM32Q13049 653 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 LBX2Q6XYB7 198 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 Q7L0L9 218 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 C12orf42Q96LP6 360 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 ABCF2Q9UG63 623 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
RPUSD4-202ENST00000525812 MYH2Q9UKX2 1941 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 A0A1B0GUL7 405 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L10C9JJH3 530 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 PLCG2P16885 1265 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 CYP2B6P20813 491 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 ADORA1P30542 326 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 RGS2P41220 211 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 IRX3P78415 501 aaPredicted RBP9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 SLFN5Q08AF3 891 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 Q3C1V9 767 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 TMED8Q6PL24 325 aaPredicted RBP9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 TXNRD2Q9NNW7 524 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 HMG20BQ9P0W2 317 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 TTC28Q96AY4 2481 aa9.14□□□□□ -0.95
RPUSD4-202ENST00000525812 DOCK1Q14185 1865 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 DNAH12Q6ZR08 3092 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 GLRX3O76003 335 aaKnown RBP9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 SYN1P17600 705 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms