RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 UBXN2AP68543 259 aa16.8■□□□□ 0.28
IFITM1-203ENST00000525554 OS9Q13438 667 aaPredicted RBP16.8■□□□□ 0.28
IFITM1-203ENST00000525554 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
IFITM1-203ENST00000525554 NAA16Q6N069 864 aaPredicted RBP16.8■□□□□ 0.28
IFITM1-203ENST00000525554 ZNF280CQ8ND82 737 aa16.8■□□□□ 0.28
IFITM1-203ENST00000525554 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
IFITM1-203ENST00000525554 PXYLP1Q8TE99 480 aa16.8■□□□□ 0.28
IFITM1-203ENST00000525554 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
IFITM1-203ENST00000525554 GINM1Q9NU53 330 aa16.8■□□□□ 0.28
IFITM1-203ENST00000525554 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.28
IFITM1-203ENST00000525554 IRF5Q13568 498 aa16.79■□□□□ 0.28
IFITM1-203ENST00000525554 CERS3Q8IU89 383 aa16.79■□□□□ 0.28
IFITM1-203ENST00000525554 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
IFITM1-203ENST00000525554 AS3MTQ9HBK9 375 aa16.79■□□□□ 0.28
IFITM1-203ENST00000525554 DOCK1Q14185 1865 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 GJA8P48165 433 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
IFITM1-203ENST00000525554 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
IFITM1-203ENST00000525554 PRKCZQ05513 592 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 SPP2Q13103 211 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 SH3D19Q5HYK7 790 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
IFITM1-203ENST00000525554 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 CEP290O15078 2479 aa16.78■□□□□ 0.28
IFITM1-203ENST00000525554 CYP2E1P05181 493 aaPredicted RBP16.77■□□□□ 0.28
IFITM1-203ENST00000525554 SLURP2P0DP57 97 aa16.77■□□□□ 0.28
IFITM1-203ENST00000525554 MTFR1Q15390 333 aa16.77■□□□□ 0.28
IFITM1-203ENST00000525554 FAM110CQ1W6H9 321 aa16.77■□□□□ 0.28
IFITM1-203ENST00000525554 HABP4Q5JVS0 413 aaKnown RBP16.77■□□□□ 0.28
IFITM1-203ENST00000525554 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
IFITM1-203ENST00000525554 WDR18Q9BV38 432 aa16.77■□□□□ 0.28
IFITM1-203ENST00000525554 SNRKQ9NRH2 765 aa16.77■□□□□ 0.28
IFITM1-203ENST00000525554 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
IFITM1-203ENST00000525554 ZSWIM8A7E2V4 1837 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 PHIPQ8WWQ0 1821 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 TNPO2O14787 897 aaKnown RBP16.76■□□□□ 0.27
IFITM1-203ENST00000525554 MYCP01106 439 aaPredicted RBP16.76■□□□□ 0.27
IFITM1-203ENST00000525554 ASNSP08243 561 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 CCL5P13501 91 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 FLT3LGP49771 235 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 ITPRIPQ8IWB1 547 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 COA7Q96BR5 231 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 AATFQ9NY61 560 aaKnown RBP eCLIP16.76■□□□□ 0.27
IFITM1-203ENST00000525554 PTPRFP10586 1907 aa16.76■□□□□ 0.27
IFITM1-203ENST00000525554 C19orf81C9J6K1 198 aa16.75■□□□□ 0.27
IFITM1-203ENST00000525554 ADCY3O60266 1144 aa16.75■□□□□ 0.27
IFITM1-203ENST00000525554 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
IFITM1-203ENST00000525554 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
IFITM1-203ENST00000525554 TGFBRAP1Q8WUH2 860 aa16.75■□□□□ 0.27
IFITM1-203ENST00000525554 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
IFITM1-203ENST00000525554 GABRQQ9UN88 632 aa16.75■□□□□ 0.27
IFITM1-203ENST00000525554 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 MS4A1P11836 297 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 BACE1P56817 501 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 TREML2Q5T2D2 321 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 UBE2Q1Q7Z7E8 422 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 SHISA4Q96DD7 197 aa16.74■□□□□ 0.27
IFITM1-203ENST00000525554 MGAMO43451 1857 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 FLT1P17948 1338 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 RLBP1P12271 317 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
IFITM1-203ENST00000525554 ZAP70P43403 619 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 HMGCS2P54868 508 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 CCDC84Q86UT8 332 aaPredicted RBP16.73■□□□□ 0.27
IFITM1-203ENST00000525554 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
IFITM1-203ENST00000525554 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
IFITM1-203ENST00000525554 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
IFITM1-203ENST00000525554 SGPL1O95470 568 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
IFITM1-203ENST00000525554 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 ADGRA1Q86SQ6 560 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 MIER1Q8N108 512 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
IFITM1-203ENST00000525554 U2AF1L4Q8WU68 220 aaKnown RBP16.72■□□□□ 0.27
IFITM1-203ENST00000525554 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
IFITM1-203ENST00000525554 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
IFITM1-203ENST00000525554 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
IFITM1-203ENST00000525554 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
IFITM1-203ENST00000525554 CYP7A1P22680 504 aa16.71■□□□□ 0.27
IFITM1-203ENST00000525554 CCDC8Q9H0W5 538 aaPredicted RBP16.71■□□□□ 0.27
IFITM1-203ENST00000525554 PIH1D3Q9NQM4 214 aaKnown RBP16.71■□□□□ 0.27
IFITM1-203ENST00000525554 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
IFITM1-203ENST00000525554 PALD1Q9ULE6 856 aa16.71■□□□□ 0.27
IFITM1-203ENST00000525554 H0YGN5 161 aa16.7■□□□□ 0.26
IFITM1-203ENST00000525554 INHAP05111 366 aa16.7■□□□□ 0.26
IFITM1-203ENST00000525554 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
IFITM1-203ENST00000525554 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
IFITM1-203ENST00000525554 GTF3C2Q8WUA4 911 aaPredicted RBP16.7■□□□□ 0.26
IFITM1-203ENST00000525554 DPF3Q92784 378 aa16.7■□□□□ 0.26
IFITM1-203ENST00000525554 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
IFITM1-203ENST00000525554 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
IFITM1-203ENST00000525554 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms