RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TARS2Q9BW92 718 aaKnown RBP5.44□□□□□ -1.54
CD44-213ENST00000525209 TNKS2Q9H2K2 1166 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 FAM13BQ9NYF5 915 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 ZFATQ9P243 1243 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
CD44-213ENST00000525209 HCN4Q9Y3Q4 1203 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 DGKBQ9Y6T7 804 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 A6NHS1 94 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 C9IYK1 514 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 RPLP1P05386 114 aaKnown RBP5.43□□□□□ -1.54
CD44-213ENST00000525209 CRKP46108 304 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 RENBPP51606 427 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 GDF10P55107 478 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 NNTQ13423 1086 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 AGERQ15109 404 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 SAFBQ15424 915 aaKnown RBP eCLIP5.43□□□□□ -1.54
CD44-213ENST00000525209 CCDC85BQ15834 202 aaPredicted RBP5.43□□□□□ -1.54
CD44-213ENST00000525209 C11orf91Q3C1V1 193 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 COBLL1Q53SF7 1204 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 ZC3H12BQ5HYM0 836 aaKnown RBP5.43□□□□□ -1.54
CD44-213ENST00000525209 WDR45BQ5MNZ6 344 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 TSHZ3Q63HK5 1081 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 MSL1Q68DK7 614 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 LHFPL2Q6ZUX7 228 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 SH3RF1Q7Z6J0 888 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 TTC16Q8NEE8 873 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 TRIM52Q96A61 297 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 SLC4A9Q96Q91 983 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 CRBNQ96SW2 442 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 KIF2CQ99661 725 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 RUSC1Q9BVN2 902 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 TRIM8Q9BZR9 551 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 PUS7LQ9H0K6 701 aaKnown RBP5.43□□□□□ -1.54
CD44-213ENST00000525209 RIC8AQ9NPQ8 531 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 ACAD8Q9UKU7 415 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 GJA3Q9Y6H8 435 aa5.43□□□□□ -1.54
CD44-213ENST00000525209 GABRDO14764 452 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 GPR39O43194 453 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 SNX2O60749 519 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 WFS1O76024 890 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 TNFAIP3P21580 790 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 GSTT1P30711 240 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 GTF2A2P52657 109 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 GJA9P57773 515 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 NUCB1Q02818 461 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 STK3Q13188 491 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 PDE1CQ14123 709 aaPredicted RBP5.42□□□□□ -1.54
CD44-213ENST00000525209 GBX1Q14549 363 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 TAF11Q15544 211 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 MINDY4Q4G0A6 757 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 MZT2BQ6NZ67 158 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 MAATS1Q7Z4T9 603 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 SLC9A9Q8IVB4 645 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 NKAPQ8N5F7 415 aaKnown RBP5.42□□□□□ -1.54
CD44-213ENST00000525209 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 GPR152Q8TDT2 470 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 GOLGA1Q92805 767 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 CARD14Q9BXL6 1004 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 SENP2Q9HC62 589 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 SAGE1Q9NXZ1 904 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 TRHDEQ9UKU6 1024 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 PHTF1Q9UMS5 762 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 MAP4K5Q9Y4K4 846 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 TNKSO95271 1327 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
CD44-213ENST00000525209 CC2D2AQ9P2K1 1620 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 CLGNO14967 610 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 DDAH1O94760 285 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 MTA2O94776 668 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 PF4P02776 101 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 INHAP05111 366 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 CCT5P48643 541 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 WDR4P57081 412 aaKnown RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 PSMA6P60900 246 aaKnown RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 TBX2Q13207 712 aaPredicted RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 ELF2Q15723 593 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 FNDC3BQ53EP0 1204 aaKnown RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 TBCELQ5QJ74 424 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 POTEAQ6S8J7 498 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 LRRTM3Q86VH5 581 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 TPH2Q8IWU9 490 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 CHCHD4Q8N4Q1 142 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 GOLM1Q8NBJ4 401 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 IL17REQ8NFR9 667 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 ANKRD24Q8TF21 1146 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 IFT43Q96FT9 208 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 CDK5RAP3Q96JB5 506 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 TBATAQ96M53 351 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 ESYT1Q9BSJ8 1104 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 SPATA9Q9BWV2 254 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 ZFYVE28Q9HCC9 887 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 NLRC4Q9NPP4 1024 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 LUC7LQ9NQ29 371 aaKnown RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 SCHIP1Q9P0W5 487 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms