RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PPM1JQ5JR12 505 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 ZBTB37Q5TC79 503 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 PCNX4Q63HM2 1172 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 MPRIPQ6WCQ1 1025 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 GRIN3AQ8TCU5 1115 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 FRMD6Q96NE9 622 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 TNKS2Q9H2K2 1166 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 GTF2IRD1Q9UHL9 959 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 WWC3Q9ULE0 1092 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 SNX11Q9Y5W9 270 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 RSF1Q96T23 1441 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-208ENST00000524652 USP17L7P0C7H9 530 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 BNIP3Q12983 259 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 AOC3Q16853 763 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 OGFOD2Q6N063 350 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 ATG4DQ86TL0 474 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-208ENST00000524652 PRDM10Q9NQV6 1147 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 PICK1Q9NRD5 415 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 PCDHA4Q9UN74 947 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 PLAGL2Q9UPG8 496 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 ATAD2BQ9ULI0 1458 aa5.3□□□□□ -1.56
CSDE1-208ENST00000524652 DCDC2CA8MYV0 355 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 P4HBP07237 508 aaKnown RBP5.29□□□□□ -1.56
CSDE1-208ENST00000524652 CELA3AP09093 270 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 RASIP1Q5U651 963 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 ANGEL2Q5VTE6 544 aaKnown RBP5.29□□□□□ -1.56
CSDE1-208ENST00000524652 SV2BQ7L1I2 683 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 FAM214BQ7L5A3 538 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 C12orf40Q86WS4 652 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 POU5F2Q8N7G0 328 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 ELMO3Q96BJ8 720 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 HEXIM2Q96MH2 286 aaKnown RBP5.29□□□□□ -1.56
CSDE1-208ENST00000524652 CSADQ9Y600 493 aa5.29□□□□□ -1.56
CSDE1-208ENST00000524652 LDHBP07195 334 aaKnown RBP5.28□□□□□ -1.56
CSDE1-208ENST00000524652 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
CSDE1-208ENST00000524652 ITIH2P19823 946 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 FGD1P98174 961 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 CDC37L1Q7L3B6 337 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 UBE3DQ7Z6J8 389 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 ASB11Q8WXH4 323 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 GAL3ST3Q96A11 431 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 TRAIPQ9BWF2 469 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 RC3H2Q9HBD1 1191 aaKnown RBP5.28□□□□□ -1.56
CSDE1-208ENST00000524652 MAPK8IP1Q9UQF2 711 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 SMARCA2P51531 1590 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 HMGXB3Q12766 1538 aa5.28□□□□□ -1.56
CSDE1-208ENST00000524652 LRIG2O94898 1065 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 GNA15P30679 374 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 CD96P40200 585 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 CLCN7P51798 805 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 SLC23A3Q6PIS1 610 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 ARMCX6Q7L4S7 300 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 SPACA3Q8IXA5 215 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 PI4K2BQ8TCG2 481 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 ZNF507Q8TCN5 953 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 PRDM5Q9NQX1 630 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-208ENST00000524652 MBNL3Q9NUK0 354 aaKnown RBP5.27□□□□□ -1.57
CSDE1-208ENST00000524652 ADAMTS6Q9UKP5 1117 aa5.27□□□□□ -1.57
CSDE1-208ENST00000524652 TTF2Q9UNY4 1162 aaKnown RBP5.27□□□□□ -1.57
CSDE1-208ENST00000524652 NCAPD3P42695 1498 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 PRAMEF27A3QJZ7 478 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 GNAT3A8MTJ3 354 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 PRPF40AO75400 957 aaKnown RBP5.26□□□□□ -1.57
CSDE1-208ENST00000524652 EOMESO95936 686 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 EIF4BP23588 611 aaKnown RBP5.26□□□□□ -1.57
CSDE1-208ENST00000524652 CAP2P40123 477 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 RPS26P62854 115 aaKnown RBP5.26□□□□□ -1.57
CSDE1-208ENST00000524652 INPP5AQ14642 412 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 LRFN4Q6PJG9 635 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 CYFIP1Q7L576 1253 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 HDXQ7Z353 690 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 SNCAIPQ9Y6H5 919 aa5.26□□□□□ -1.57
CSDE1-208ENST00000524652 NKPD1Q17RQ9 610 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 TTBK2Q6IQ55 1244 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 C22orf34Q6ZV56 151 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 MFSD2AQ8NA29 543 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 LRRN4CLQ8ND94 238 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 FLAD1Q8NFF5 587 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 PLPPR2Q96GM1 343 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 FOXQ1Q9C009 403 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 WNT10AQ9GZT5 417 aa5.25□□□□□ -1.57
CSDE1-208ENST00000524652 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-208ENST00000524652 BAZ1BQ9UIG0 1483 aaKnown RBP5.25□□□□□ -1.57
CSDE1-208ENST00000524652 PITPNM2Q9BZ72 1349 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 CARMIL2Q6F5E8 1435 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 TOP2AP11388 1531 aaKnown RBP5.24□□□□□ -1.57
CSDE1-208ENST00000524652 C8AP07357 584 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 ZNF865P0CJ78 1059 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-208ENST00000524652 PTPN11Q06124 597 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-208ENST00000524652 IKZF1Q13422 519 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 SLBPQ14493 270 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSDE1-208ENST00000524652 WIPI1Q5MNZ9 446 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-208ENST00000524652 ZNF746Q6NUN9 644 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-208ENST00000524652 FAM168AQ92567 244 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 FBRSQ9HAH7 460 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 TACC3Q9Y6A5 838 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 AK5Q9Y6K8 562 aa5.24□□□□□ -1.57
CSDE1-208ENST00000524652 SLITRK5O94991 958 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms