RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 CACTINQ8WUQ7 758 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ZNF830Q96NB3 372 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 FTOQ9C0B1 505 aaKnown RBP eCLIP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 TRPC5Q9UL62 973 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ORC4O43929 436 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 WDHD1O75717 1129 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 DDAH1O94760 285 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SYKP43405 635 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SARSP49591 514 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CCZ1BP86790 482 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CCZ1P86791 482 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 MDM2Q00987 491 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CHRNDQ07001 517 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 RTN1Q16799 776 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SBK1Q52WX2 424 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SHC4Q6S5L8 630 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 FBXO33Q7Z6M2 555 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CRACR2BQ8N4Y2 399 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 KRI1Q8N9T8 703 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC112Q8NEF3 446 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 PYM1Q9BRP8 204 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 RIOK1Q9BRS2 568 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 NYXQ9GZU5 481 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 DACH1Q9UI36 760 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 IQSEC3Q9UPP2 1182 aaPredicted RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC9Q9Y3X0 531 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 A0A1B0GVL5 298 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ERICH2A1L162 156 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 IFIT3O14879 490 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 PRPF3O43395 683 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ATP6V1AP38606 617 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 PPARAQ07869 468 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ITPK1Q13572 414 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 WTAPQ15007 396 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ZRSR1Q15695 479 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SLC27A3Q5K4L6 730 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 DNTTIP2Q5QJE6 756 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 C15orf52Q6ZUT6 534 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CERS3Q8IU89 383 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ANKS1AQ92625 1134 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 ESR2Q92731 530 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SRPRBQ9Y5M8 271 aaKnown RBP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 MYH13Q9UKX3 1938 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 NRDCO43847 1150 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 TRAPPC10P48553 1259 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC144BQ3MJ40 725 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 KRBA2Q6ZNG9 492 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 DRC7Q8IY82 874 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 MLKLQ8NB16 471 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 FANCBQ8NB91 859 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 SPC24Q8NBT2 197 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 GJD4Q96KN9 370 aaPredicted RBP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 ANKRD2Q9GZV1 360 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 TMX1Q9H3N1 280 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 TACC3Q9Y6A5 838 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 SLC4A4Q9Y6R1 1079 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 MROH7-TTC4A0A0A0MT08 1334 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 COL1A1P02452 1464 aaPredicted RBP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 APPP05067 770 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 POLR3DP05423 398 aaPredicted RBP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 XBP1P17861 261 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 GUCY1B3Q02153 619 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 CEBPZQ03701 1054 aaKnown RBP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 FUT2Q10981 343 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 DPCR1Q3MIW9 517 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC178Q5BJE1 867 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 NFXL1Q6ZNB6 911 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 ANKRD18AQ8IVF6 992 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 LCORLQ8N3X6 602 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 PDCL2Q8N4E4 241 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 AOPEPQ8N6M6 819 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC34Q96HJ3 373 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 FAM13BQ9NYF5 915 aa6.28□□□□□ -1.4
CLINT1-208ENST00000524306 FBXO2Q9UK22 296 aaPredicted RBP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 NAP1L2Q9ULW6 460 aaPredicted RBP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLINT1-208ENST00000524306 IRS2Q9Y4H2 1338 aa6.27□□□□□ -1.4
CLINT1-208ENST00000524306 ROBO3Q96MS0 1386 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 MAGEB6P1A0A0J9YX57 407 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 DTNBO60941 627 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 ERCC5P28715 1186 aaPredicted RBP6.27□□□□□ -1.41
CLINT1-208ENST00000524306 PLCB2Q00722 1185 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 MYL5Q02045 173 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 CAVIN4Q5BKX8 364 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 ZNF654Q8IZM8 581 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 CCAR2Q8N163 923 aaKnown RBP6.27□□□□□ -1.41
CLINT1-208ENST00000524306 ENOX1Q8TC92 643 aaKnown RBP6.27□□□□□ -1.41
CLINT1-208ENST00000524306 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 PHF20Q9BVI0 1012 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 HSD3B7Q9H2F3 369 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 ARMT1Q9H993 441 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 ATP8A2Q9NTI2 1148 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 AATFQ9NY61 560 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLINT1-208ENST00000524306 NRBP1Q9UHY1 535 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 KCNH3Q9ULD8 1083 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 NIP7Q9Y221 180 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLINT1-208ENST00000524306 ZNF330Q9Y3S2 320 aaPredicted RBP6.27□□□□□ -1.41
CLINT1-208ENST00000524306 RPS6KA4O75676 772 aa6.27□□□□□ -1.41
CLINT1-208ENST00000524306 TDO2P48775 406 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms