RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	STK11IP	Q8N1F8	1099 aa		12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	RGS22	Q8NE09	1264 aa		12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	SDR42E1	Q8WUS8	393 aa		12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	LY9	Q9HBG7	655 aa		12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	C10orf71	Q711Q0	1435 aa		12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	COL11A2	P13942	1736 aa	Predicted RBP	12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	NRXN2	Q9P2S2	1712 aa		12.51	□□□□□ -0.41
SPIDR-222	ENST00000524006	CTAGE5	O15320	804 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	BAG3	O95817	575 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	GYS1	P13807	737 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	XBP1	P17861	261 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	ATP2B4	P23634	1241 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	MSN	P26038	577 aa	Known RBP	12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	USP5	P45974	858 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	RCAN1	P53805	252 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	TGFB2	P61812	414 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	MECOM	Q03112	1051 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	PDE4B	Q07343	736 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	TMC4	Q7Z404	712 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	CATIP	Q7Z7H3	387 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	NLGN1	Q8N2Q7	840 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	JMY	Q8N9B5	988 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	KCNG4	Q8TDN1	519 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	NUP133	Q8WUM0	1156 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	PPP1R9B	Q96SB3	815 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	SLC26A6	Q9BXS9	759 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	CLSTN2	Q9H4D0	955 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	CCDC39	Q9UFE4	941 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	GGA1	Q9UJY5	639 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	HPS5	Q9UPZ3	1129 aa		12.5	□□□□□ -0.41
SPIDR-222	ENST00000524006	LTBP1	Q14766	1721 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	NID2	Q14112	1375 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	RANBP6	O60518	1105 aa	Known RBP	12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	PPFIA3	O75145	1194 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	CALM1	P0DP23	149 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	CALM2	P0DP24	149 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	CALM3	P0DP25	149 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	RXRA	P19793	462 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	KLRK1	P26718	216 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	DYNLL1	P63167	89 aa	Known RBP	12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	SLF2	Q8IX21	1173 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	FBXO18	Q8NFZ0	1043 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	ATP8A2	Q9NTI2	1148 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	ANAPC4	Q9UJX5	808 aa		12.49	□□□□□ -0.41
SPIDR-222	ENST00000524006	DDX60L	Q5H9U9	1706 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	TNKS	O95271	1327 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	YEATS4	O95619	227 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	DPEP1	P16444	411 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	KCNA3	P22001	575 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	NT5C2	P49902	561 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	PPP2R5B	Q15173	497 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	IFIT1B	Q5T764	474 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	CCAR1	Q8IX12	1150 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	ZNF654	Q8IZM8	581 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	FSIP1	Q8NA03	581 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	IGDCC4	Q8TDY8	1250 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	NSUN4	Q96CB9	384 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	ZKSCAN3	Q9BRR0	538 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	RIOK1	Q9BRS2	568 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	RBM28	Q9NW13	759 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	DACT1	Q9NYF0	836 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	ZSWIM5	Q9P217	1185 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	BCS1L	Q9Y276	419 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006	KIF13B	Q9NQT8	1826 aa		12.48	□□□□□ -0.41
SPIDR-222	ENST00000524006		G3V3G9	751 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	FMNL1	O95466	1100 aa	Predicted RBP	12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	PLCG2	P16885	1265 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	LIG1	P18858	919 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	DCAF8	Q5TAQ9	597 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	ADGRA1	Q86SQ6	560 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	MRPS27	Q92552	414 aa	Known RBP	12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	USP28	Q96RU2	1077 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	MYL10	Q9BUA6	226 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	ZNF287	Q9HBT7	754 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	BRMS1	Q9HCU9	246 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	RTEL1	Q9NZ71	1219 aa		12.47	□□□□□ -0.41
SPIDR-222	ENST00000524006	C6orf229	H3BNL8	230 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	PPEF1	O14829	653 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	BBOX1	O75936	387 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	DDAH1	O94760	285 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	DEXI	O95424	95 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	CAVIN2	O95810	425 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	FDPS	P14324	419 aa	Known RBP	12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	PRDX5	P30044	214 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	PLCB2	Q00722	1185 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	KIF23	Q02241	960 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	FAM160A1	Q05DH4	1040 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	CAMK4	Q16566	473 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	CCDC178	Q5BJE1	867 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	MYSM1	Q5VVJ2	828 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	KRT40	Q6A162	431 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	CTCFL	Q8NI51	663 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	TBC1D22A	Q8WUA7	517 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	PHKB	Q93100	1093 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	RCOR1	Q9UKL0	485 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	JAG2	Q9Y219	1238 aa		12.46	□□□□□ -0.41
SPIDR-222	ENST00000524006	MYH4	Q9Y623	1939 aa		12.45	□□□□□ -0.42

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