RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
VEGFA-225ENST00000523950 EHD4Q9H223 541 aa15.11■□□□□ 0.01
VEGFA-225ENST00000523950 ARMT1Q9H993 441 aa15.11■□□□□ 0.01
VEGFA-225ENST00000523950 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.013e-7■■■■■ 34.2
VEGFA-225ENST00000523950 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
VEGFA-225ENST00000523950 GNAT2P19087 354 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 INPP5BP32019 993 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 TM4SF4P48230 202 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 PPATQ06203 517 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 CENPQQ7L2Z9 268 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-225ENST00000523950 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-225ENST00000523950 ZKSCAN4Q969J2 545 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-225ENST00000523950 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 PUS7LQ9H0K6 701 aaKnown RBP15.1■□□□□ 0.01
VEGFA-225ENST00000523950 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-225ENST00000523950 GINM1Q9NU53 330 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 SAGE1Q9NXZ1 904 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
VEGFA-225ENST00000523950 PPIL2Q13356 520 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 GIMAP6Q6P9H5 292 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 SDR42E1Q8WUS8 393 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 ZIC5Q96T25 663 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 TBC1D2Q9BYX2 928 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 PICK1Q9NRD5 415 aa15.09■□□□□ 0.01
VEGFA-225ENST00000523950 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
VEGFA-225ENST00000523950 BAZ2AQ9UIF9 1905 aaKnown RBP15.08■□□□□ 0
VEGFA-225ENST00000523950 TESPA1A2RU30 521 aaPredicted RBP15.08■□□□□ 0
VEGFA-225ENST00000523950 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 CHGBP05060 677 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
VEGFA-225ENST00000523950 GJA5P36382 358 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 GTF2A2P52657 109 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 ZMYM1Q5SVZ6 1142 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 AMOTL1Q8IY63 956 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 OSBP2Q969R2 916 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 OTUD5Q96G74 571 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 STRBPQ96SI9 672 aaKnown RBP15.08■□□□□ 0
VEGFA-225ENST00000523950 MCM9Q9NXL9 1143 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 SERPINB13Q9UIV8 391 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 SLC4A4Q9Y6R1 1079 aa15.08■□□□□ 0
VEGFA-225ENST00000523950 GPAA1O43292 621 aa15.07■□□□□ 0
VEGFA-225ENST00000523950 ALDH1A1P00352 501 aa15.07■□□□□ 0
VEGFA-225ENST00000523950 PDE4AP27815 886 aa15.07■□□□□ 0
VEGFA-225ENST00000523950 CAP2P40123 477 aa15.07■□□□□ 0
VEGFA-225ENST00000523950 CTCFP49711 727 aaPredicted RBP15.07■□□□□ 0
VEGFA-225ENST00000523950 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
VEGFA-225ENST00000523950 ARPP21Q9UBL0 812 aaPredicted RBP15.07■□□□□ 0
VEGFA-225ENST00000523950 PHIPQ8WWQ0 1821 aa15.07■□□□□ 0
VEGFA-225ENST00000523950 MYH8P13535 1937 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 FAM196BA6NMK8 535 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 HIP1O00291 1037 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 FOXN1O15353 648 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 SNAPC2Q13487 334 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 RILPL2Q969X0 211 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 CFHR5Q9BXR6 569 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 DNAJC18Q9H819 358 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 HELLSQ9NRZ9 838 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
VEGFA-225ENST00000523950 SWAP70Q9UH65 585 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 KCNH4Q9UQ05 1017 aa15.06■□□□□ 0
VEGFA-225ENST00000523950 M0R2C6 588 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 CXCL11O14625 94 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 IRF6O14896 467 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 PRKAB2O43741 272 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 ASNSP08243 561 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 CETPP11597 493 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 PTPRAP18433 802 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 GABPAQ06546 454 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 TTC22Q5TAA0 569 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 TATDN1Q6P1N9 297 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 CCDC136Q96JN2 1154 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 MS4A4AQ96JQ5 239 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 ZCCHC17Q9NP64 241 aaKnown RBP15.05■□□□□ -0
VEGFA-225ENST00000523950 RNF186Q9NXI6 227 aa15.05■□□□□ -0
VEGFA-225ENST00000523950 PTPRFP10586 1907 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 GSG1L2A8MUP6 293 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
VEGFA-225ENST00000523950 SLURP2P0DP57 97 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 HSPA8P11142 646 aaKnown RBP15.04■□□□□ -0
VEGFA-225ENST00000523950 PLCD1P51178 756 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 SBK1Q52WX2 424 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 C12orf60Q5U649 245 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 IFNL1Q8IU54 200 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 NACAP1Q9BZK3 213 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 AS3MTQ9HBK9 375 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 ZHX2Q9Y6X8 837 aa15.04■□□□□ -0
VEGFA-225ENST00000523950 CCL15-CCL14A0A0B4J2E2 113 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 USP17L12C9JPN9 530 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 USP17L21D6R901 530 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 CCL15Q16663 113 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 MCMDC2Q4G0Z9 681 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 NOM1Q5C9Z4 860 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms