RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 MOGSQ13724 837 aa11.57□□□□□ -0.56
PABPC1-222ENST00000523555 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
PABPC1-222ENST00000523555 SCYL3Q8IZE3 742 aa11.57□□□□□ -0.56
PABPC1-222ENST00000523555 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
PABPC1-222ENST00000523555 CFHR5Q9BXR6 569 aa11.57□□□□□ -0.56
PABPC1-222ENST00000523555 MCOLN1Q9GZU1 580 aa11.57□□□□□ -0.56
PABPC1-222ENST00000523555 PALD1Q9ULE6 856 aa11.57□□□□□ -0.56
PABPC1-222ENST00000523555 BTBD19C9JJ37 291 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 TBC1D12O60347 775 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 PTPRAP18433 802 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 ADD2P35612 726 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 GTF2A2P52657 109 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 INHBEP58166 350 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-222ENST00000523555 PPATQ06203 517 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 TTF1Q15361 905 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-222ENST00000523555 LCORLQ8N3X6 602 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.56□□□□□ -0.56
PABPC1-222ENST00000523555 BRCA2P51587 3418 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 SALL3Q9BXA9 1300 aa11.56□□□□□ -0.56
PABPC1-222ENST00000523555 IGSF3O75054 1194 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 PLCG2P16885 1265 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 DGKZQ13574 1117 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 PI4K2BQ8TCG2 481 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 SDR42E1Q8WUS8 393 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 ARMT1Q9H993 441 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 ECHDC1Q9NTX5 307 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 KCNH4Q9UQ05 1017 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 MGAMO43451 1857 aa11.55□□□□□ -0.56
PABPC1-222ENST00000523555 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 SMIM22K7EJ46 135 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 PRKAB2O43741 272 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 CTNND1O60716 968 aaKnown RBP11.54□□□□□ -0.56
PABPC1-222ENST00000523555 IGHDP01880 384 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 USP5P45974 858 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 SNAPC2Q13487 334 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 HDAC1Q13547 482 aaPredicted RBP11.54□□□□□ -0.56
PABPC1-222ENST00000523555 METTL16Q86W50 562 aaKnown RBP11.54□□□□□ -0.56
PABPC1-222ENST00000523555 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 PI4KBQ9UBF8 816 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 AFG3L2Q9Y4W6 797 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 ZHX2Q9Y6X8 837 aa11.54□□□□□ -0.56
PABPC1-222ENST00000523555 MBD4O95243 580 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 GDF11O95390 407 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 CETPP11597 493 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 CAP2P40123 477 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 PLCD1P51178 756 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 TAF1CQ15572 869 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-222ENST00000523555 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 GPAT2Q6NUI2 795 aa11.53□□□□□ -0.56
PABPC1-222ENST00000523555 PUS7LQ9H0K6 701 aaKnown RBP11.53□□□□□ -0.56
PABPC1-222ENST00000523555 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
PABPC1-222ENST00000523555 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-222ENST00000523555 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
PABPC1-222ENST00000523555 FKTNO75072 461 aa11.52□□□□□ -0.57
PABPC1-222ENST00000523555 CYP2D6P10635 497 aa11.52□□□□□ -0.57
PABPC1-222ENST00000523555 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
PABPC1-222ENST00000523555 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-222ENST00000523555 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.57
PABPC1-222ENST00000523555 PICK1Q9NRD5 415 aa11.52□□□□□ -0.57
PABPC1-222ENST00000523555 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.57
PABPC1-222ENST00000523555 PDHXO00330 501 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 UBE3CQ15386 1083 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 B4GALNT3Q6L9W6 998 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
PABPC1-222ENST00000523555 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-222ENST00000523555 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 DCP1AQ9NPI6 582 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-222ENST00000523555 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 TTC41PQ6P2S7 1318 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 ADGRA2Q96PE1 1338 aa11.51□□□□□ -0.57
PABPC1-222ENST00000523555 CYP2D7A0A087X1C5 515 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 CXCL11O14625 94 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-222ENST00000523555 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 CYP2C8P10632 490 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 MX1P20591 662 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 CTGFP29279 349 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 SHMT1P34896 483 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 SPP2Q13103 211 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 TMED8Q6PL24 325 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-222ENST00000523555 GADL1Q6ZQY3 521 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 ANKRD23Q86SG2 305 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 FOXP4Q8IVH2 680 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-222ENST00000523555 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 OSBP2Q969R2 916 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 SEC62Q99442 399 aaKnown RBP11.5□□□□□ -0.57
PABPC1-222ENST00000523555 CRNKL1Q9BZJ0 848 aaKnown RBP11.5□□□□□ -0.57
PABPC1-222ENST00000523555 LNPKQ9C0E8 428 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 ARHGAP39Q9C0H5 1083 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
PABPC1-222ENST00000523555 ZFYVE28Q9HCC9 887 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 MCM9Q9NXL9 1143 aa11.5□□□□□ -0.57
PABPC1-222ENST00000523555 M0R2C6 588 aa11.49□□□□□ -0.57
PABPC1-222ENST00000523555 TLR2O60603 784 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms