RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
VIRMA-208ENST00000523263 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 SYN1P17600 705 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
VIRMA-208ENST00000523263 CAP2P40123 477 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 BTDP43251 543 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 TRIM32Q13049 653 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 DZIP1Q86YF9 867 aaKnown RBP11.75□□□□□ -0.53
VIRMA-208ENST00000523263 SOCS4Q8WXH5 440 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 TRIB2Q92519 343 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
VIRMA-208ENST00000523263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.53
VIRMA-208ENST00000523263 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 PFASO15067 1338 aa11.75□□□□□ -0.53
VIRMA-208ENST00000523263 SLURP2P0DP57 97 aa11.74□□□□□ -0.53
VIRMA-208ENST00000523263 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
VIRMA-208ENST00000523263 USP6NLQ92738 828 aa11.74□□□□□ -0.53
VIRMA-208ENST00000523263 COPRSQ9NQ92 184 aa11.74□□□□□ -0.53
VIRMA-208ENST00000523263 GINM1Q9NU53 330 aa11.74□□□□□ -0.53
VIRMA-208ENST00000523263 HERC5Q9UII4 1024 aaKnown RBP11.74□□□□□ -0.53
VIRMA-208ENST00000523263 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
VIRMA-208ENST00000523263 LDHCP07864 332 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
VIRMA-208ENST00000523263 MAPK4P31152 587 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 HMGCS2P54868 508 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 PICALMQ13492 652 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 RASGRF1Q13972 1273 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 LHX8Q68G74 356 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.73□□□□□ -0.53
VIRMA-208ENST00000523263 GTF3C2Q8WUA4 911 aaPredicted RBP11.73□□□□□ -0.53
VIRMA-208ENST00000523263 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
VIRMA-208ENST00000523263 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
VIRMA-208ENST00000523263 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 CYP2B6P20813 491 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 BACE1P56817 501 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 GSTO1P78417 241 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 MECOMQ03112 1051 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
VIRMA-208ENST00000523263 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 METTL16Q86W50 562 aaKnown RBP11.72□□□□□ -0.53
VIRMA-208ENST00000523263 GPRC5AQ8NFJ5 357 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 ZNF384Q8TF68 577 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 SIL1Q9H173 461 aa11.72□□□□□ -0.53
VIRMA-208ENST00000523263 DHX36Q9H2U1 1008 aaKnown RBP11.72□□□□□ -0.53
VIRMA-208ENST00000523263 ALPK3Q96L96 1907 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
VIRMA-208ENST00000523263 ADORA1P30542 326 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 IRX3P78415 501 aaPredicted RBP11.71□□□□□ -0.53
VIRMA-208ENST00000523263 MVPQ14764 893 aaKnown RBP11.71□□□□□ -0.53
VIRMA-208ENST00000523263 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 MORN1Q5T089 497 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 NSUN4Q96CB9 384 aaKnown RBP11.71□□□□□ -0.53
VIRMA-208ENST00000523263 GUCD1Q96NT3 240 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 P2RX7Q99572 595 aaKnown RBP11.71□□□□□ -0.53
VIRMA-208ENST00000523263 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 AKAP2Q9Y2D5 859 aa11.71□□□□□ -0.53
VIRMA-208ENST00000523263 DOCK2Q92608 1830 aa11.71□□□□□ -0.54
VIRMA-208ENST00000523263 DOCK1Q14185 1865 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 PHIPQ8WWQ0 1821 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 IGSF3O75054 1194 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 ASNSP08243 561 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
VIRMA-208ENST00000523263 RGS2P41220 211 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 TIMM10P62072 90 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 HERVK_113P62684 666 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 RRP1BQ14684 758 aaKnown RBP11.7□□□□□ -0.54
VIRMA-208ENST00000523263 LRRC26Q2I0M4 334 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
VIRMA-208ENST00000523263 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 RBPJLQ9UBG7 517 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 LAMA3Q16787 3333 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 PTPRFP10586 1907 aa11.7□□□□□ -0.54
VIRMA-208ENST00000523263 COL6A3P12111 3177 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 USP17L10C9JJH3 530 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 ERVK-9P63128 1117 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 ERVK-24P63145 666 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
VIRMA-208ENST00000523263 LOC285556D6RIA3 1793 aa11.69□□□□□ -0.54
VIRMA-208ENST00000523263 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 E9PSI1 815 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 MSCO60682 206 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 CCND3P30281 292 aaPredicted RBP11.68□□□□□ -0.54
VIRMA-208ENST00000523263 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
VIRMA-208ENST00000523263 MTMR2Q13614 643 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 Q3C1V9 767 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 PLEKHH3Q7Z736 793 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 APBA2Q99767 749 aa11.68□□□□□ -0.54
VIRMA-208ENST00000523263 LBHD1Q9BQE6 289 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms