RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	CERS3	Q8IU89	383 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	REM2	Q8IYK8	340 aa	Predicted RBP	10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SCYL3	Q8IZE3	742 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	KBTBD3	Q8NAB2	608 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	RIOK1	Q9BRS2	568 aa	Known RBP	10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	FSD1	Q9BTV5	496 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PICK1	Q9NRD5	415 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	MYH8	P13535	1937 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PHF20L1	A8MW92	1017 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	IRF6	O14896	467 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PRKAB2	O43741	272 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	GDF11	O95390	407 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	TM4SF4	P48230	202 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	GTF2A2	P52657	109 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PPIL2	Q13356	520 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	NOL9	Q5SY16	702 aa	Known RBP	10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	IFNL1	Q8IU54	200 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SMC5	Q8IY18	1101 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	BRI3BP	Q8WY22	251 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	DHX36	Q9H2U1	1008 aa	Known RBP	10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PRDM10	Q9NQV6	1147 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SAGE1	Q9NXZ1	904 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PI4KB	Q9UBF8	816 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ZNF112	Q9UJU3	913 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PHIP	Q8WWQ0	1821 aa		10.09	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SALL3	Q9BXA9	1300 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PTPRF	P10586	1907 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	POLR3D	P05423	398 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PDE1A	P54750	535 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	EVX2	Q03828	476 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PPAT	Q06203	517 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SNAPC2	Q13487	334 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	UBE3C	Q15386	1083 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TMED8	Q6PL24	325 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CHD1L	Q86WJ1	897 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TNS4	Q8IZW8	715 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	MS4A4A	Q96JQ5	239 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PUS7L	Q9H0K6	701 aa	Known RBP	10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	DNAJC18	Q9H819	358 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	MCM9	Q9NXL9	1143 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	HERC5	Q9UII4	1024 aa	Known RBP	10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SLC4A4	Q9Y6R1	1079 aa		10.08	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TRIM75P	A6NK02	468 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TRIM6-TRIM34	B2RNG4	842 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	RNF113A	O15541	343 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TBC1D12	O60347	775 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CTNND1	O60716	968 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CYP2D6	P10635	497 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CETP	P11597	493 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PTPRA	P18433	802 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	INHBE	P58166	350 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	RRP1B	Q14684	758 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TAF1C	Q15572	869 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	OTUD7B	Q6GQQ9	843 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	GADL1	Q6ZQY3	521 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	FAM43A	Q8N2R8	423 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	APPBP2	Q92624	585 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PTPN18	Q99952	460 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	R3HDML	Q9H3Y0	253 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ZHX2	Q9Y6X8	837 aa		10.07	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CYP2D7	A0A087X1C5	515 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941		M0R2C6	588 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	GPAA1	O43292	621 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ECM2	O94769	699 aa	Predicted RBP	10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ALDH1A1	P00352	501 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ZFY	P08048	801 aa	Predicted RBP	10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CAP2	P40123	477 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PLCD1	P51178	756 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	MAP3K10	Q02779	954 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	NUCB1	Q02818	461 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CRHR2	Q13324	411 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TTC6	Q86TZ1	520 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	AMOTL1	Q8IY63	956 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	STK11IP	Q8N1F8	1099 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	OSBP2	Q969R2	916 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	RILPL2	Q969X0	211 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	DDRGK1	Q96HY6	314 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SEC62	Q99442	399 aa	Known RBP	10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SERPINB13	Q9UIV8	391 aa		10.06	□□□□□ -0.8
CTNNA1-231	ENST00000521941	BTBD19	C9JJ37	291 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	GPR25	O00155	361 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CAPN15	O75808	1086 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	CCDC129	Q6ZRS4	1044 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SLC44A5	Q8NCS7	719 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ATP8A2	Q9NTI2	1148 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	STAP2	Q9UGK3	403 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	ZBTB21	Q9ULJ3	1066 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	KCNH4	Q9UQ05	1017 aa		10.05	□□□□□ -0.8
CTNNA1-231	ENST00000521941	LOC285556	D6RIA3	1793 aa		10.04	□□□□□ -0.8
CTNNA1-231	ENST00000521941	TESPA1	A2RU30	521 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNNA1-231	ENST00000521941	USP17L5	A8MUK1	530 aa		10.04	□□□□□ -0.8
CTNNA1-231	ENST00000521941	SMIM22	K7EJ46	135 aa		10.04	□□□□□ -0.8
CTNNA1-231	ENST00000521941	PDHX	O00330	501 aa		10.04	□□□□□ -0.8
CTNNA1-231	ENST00000521941	MPHOSPH10	O00566	681 aa	Known RBP	10.04	□□□□□ -0.8
CTNNA1-231	ENST00000521941	GH2	P01242	217 aa		10.04	□□□□□ -0.8

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