RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 HSPD1P10809 573 aaKnown RBP26.11■■□□□ 1.77
PTP4A3-204ENST00000521578 EPB41L4AQ9HCS5 686 aaPredicted RBP26.11■■□□□ 1.77
PTP4A3-204ENST00000521578 MCM9Q9NXL9 1143 aa26.11■■□□□ 1.77
PTP4A3-204ENST00000521578 MKRN1Q9UHC7 482 aaKnown RBP26.11■■□□□ 1.77
PTP4A3-204ENST00000521578 TOMM70O94826 608 aa26.1■■□□□ 1.77
PTP4A3-204ENST00000521578 NAV1Q8NEY1 1877 aa26.1■■□□□ 1.77
PTP4A3-204ENST00000521578 MYH1P12882 1939 aa26.09■■□□□ 1.77
PTP4A3-204ENST00000521578 DDTLA6NHG4 134 aaPredicted RBP26.09■■□□□ 1.77
PTP4A3-204ENST00000521578 TRAF5O00463 557 aa26.09■■□□□ 1.77
PTP4A3-204ENST00000521578 SH3BP5LQ7L8J4 393 aa26.09■■□□□ 1.77
PTP4A3-204ENST00000521578 IFNL3Q8IZI9 196 aa26.09■■□□□ 1.77
PTP4A3-204ENST00000521578 TDO2P48775 406 aa26.08■■□□□ 1.77
PTP4A3-204ENST00000521578 FMR1Q06787 632 aaKnown RBP eCLIP26.08■■□□□ 1.77
PTP4A3-204ENST00000521578 TEPSINQ96N21 525 aa26.08■■□□□ 1.77
PTP4A3-204ENST00000521578 NACAP1Q9BZK3 213 aa26.08■■□□□ 1.77
PTP4A3-204ENST00000521578 GOLGA6L22H0YM25 854 aa26.08■■□□□ 1.76
PTP4A3-204ENST00000521578 NBPF12Q5TAG4 269 aaPredicted RBP26.08■■□□□ 1.76
PTP4A3-204ENST00000521578 ZDHHC9Q9Y397 364 aa26.08■■□□□ 1.76
PTP4A3-204ENST00000521578 PPP2R3BQ9Y5P8 575 aa26.08■■□□□ 1.76
PTP4A3-204ENST00000521578 RBM8AQ9Y5S9 174 aaKnown RBP26.08■■□□□ 1.76
PTP4A3-204ENST00000521578 GIMAP6Q6P9H5 292 aa26.07■■□□□ 1.76
PTP4A3-204ENST00000521578 SMC1BQ8NDV3 1235 aa26.07■■□□□ 1.76
PTP4A3-204ENST00000521578 ZSWIM6Q9HCJ5 1215 aa26.07■■□□□ 1.76
PTP4A3-204ENST00000521578 RPAP1Q9BWH6 1393 aaPredicted RBP26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 USP17L12C9JPN9 530 aa26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 USP17L21D6R901 530 aa26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 POLR3DP05423 398 aaPredicted RBP26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 PKP1Q13835 747 aa26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 RBM46Q8TBY0 533 aaKnown RBP26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 CDCA5Q96FF9 252 aa26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 CSRNP1Q96S65 589 aa26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 NAPBQ9H115 298 aa26.06■■□□□ 1.76
PTP4A3-204ENST00000521578 CYP2D7A0A087X1C5 515 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 ITGBL1O95965 494 aaPredicted RBP26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 CYP2D6P10635 497 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 ZKSCAN1P17029 563 aaPredicted RBP26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 EVX2Q03828 476 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 CREB3L3Q68CJ9 461 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 FGAP02671 866 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 CTR9Q6PD62 1173 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 DSCC1Q9BVC3 393 aa26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 DHX36Q9H2U1 1008 aaKnown RBP26.05■■□□□ 1.76
PTP4A3-204ENST00000521578 ATRNL1Q5VV63 1379 aa26.04■■□□□ 1.76
PTP4A3-204ENST00000521578 DDX60LQ5H9U9 1706 aaKnown RBP26.04■■□□□ 1.76
PTP4A3-204ENST00000521578 PLCD1P51178 756 aa26.04■■□□□ 1.76
PTP4A3-204ENST00000521578 AK2P54819 239 aa26.04■■□□□ 1.76
PTP4A3-204ENST00000521578 LIMCH1Q9UPQ0 1083 aa26.04■■□□□ 1.76
PTP4A3-204ENST00000521578 MINDY4BA8MYZ0 360 aa26.03■■□□□ 1.76
PTP4A3-204ENST00000521578 SMIM22K7EJ46 135 aa26.03■■□□□ 1.76
PTP4A3-204ENST00000521578 SLURP2P0DP57 97 aa26.03■■□□□ 1.76
PTP4A3-204ENST00000521578 COL2A1P02458 1487 aaPredicted RBP26.03■■□□□ 1.76
PTP4A3-204ENST00000521578 SLC27A2O14975 620 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 CASTP20810 708 aaKnown RBP26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 ALX1Q15699 326 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 NOL8Q76FK4 1167 aaKnown RBP26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 RUFY3Q7L099 469 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 AMOTL1Q8IY63 956 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 JAKMIP1Q96N16 626 aaKnown RBP26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 ZNF408Q9H9D4 720 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 ARPP21Q9UBL0 812 aaPredicted RBP26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 BRD1O95696 1058 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 HLA-DOAP06340 250 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 ADCK5Q3MIX3 580 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 TSGA10IPQ3SY00 556 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 SUPT20HL1Q3ZLR7 823 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 C12orf60Q5U649 245 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 RNF20Q5VTR2 975 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 MIGA2Q7L4E1 593 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 TTC6Q86TZ1 520 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 PI4KBQ9UBF8 816 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 CYP46A1Q9Y6A2 500 aa26.02■■□□□ 1.76
PTP4A3-204ENST00000521578 PDRG1Q9NUG6 133 aa26.01■■□□□ 1.75
PTP4A3-204ENST00000521578 FZD1Q9UP38 647 aa26.01■■□□□ 1.75
PTP4A3-204ENST00000521578 PSMA5P28066 241 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 PRKG1Q13976 671 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 SBK1Q52WX2 424 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 STK11IPQ8N1F8 1099 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 SSC5DA1L4H1 1573 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 FSD2A1L4K1 749 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 FAM196BA6NMK8 535 aa26■■□□□ 1.75
PTP4A3-204ENST00000521578 SIPA1L1O43166 1804 aa25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 NF2P35240 595 aa25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 HAND2P61296 217 aa25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 FSTL1Q12841 308 aa25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 L1TD1Q5T7N2 865 aaKnown RBP25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 DYNLL2Q96FJ2 89 aa25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 ZSCAN31Q96LW9 406 aaPredicted RBP25.99■■□□□ 1.75
PTP4A3-204ENST00000521578 ZMYM6O95789 1325 aa25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 CELF2O95319 508 aaKnown RBP25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 PPARAQ07869 468 aa25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 CRACR2BQ8N4Y2 399 aaPredicted RBP25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 GZF1Q9H116 711 aaPredicted RBP25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 ALDH8A1Q9H2A2 487 aaPredicted RBP25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 SERPINB13Q9UIV8 391 aa25.98■■□□□ 1.75
PTP4A3-204ENST00000521578 PASKQ96RG2 1323 aa25.97■■□□□ 1.75
PTP4A3-204ENST00000521578 FOXP4Q8IVH2 680 aaPredicted RBP25.97■■□□□ 1.75
PTP4A3-204ENST00000521578 HOOK2Q96ED9 719 aa25.97■■□□□ 1.75
PTP4A3-204ENST00000521578 TRIM34Q9BYJ4 488 aa25.97■■□□□ 1.75
PTP4A3-204ENST00000521578 CTNNA3Q9UI47 895 aa25.97■■□□□ 1.75
PTP4A3-204ENST00000521578 U3KPZ7 1027 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms