RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 NBPF7P0C2Y1 421 aaPredicted RBP11.14□□□□□ -0.63
MRPS28-207ENST00000521434 FGFR2P21802 821 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 MAP3K10Q02779 954 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 EXOSC9Q06265 439 aaKnown RBP11.14□□□□□ -0.63
MRPS28-207ENST00000521434 LHX8Q68G74 356 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 OGDHLQ9ULD0 1010 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
MRPS28-207ENST00000521434 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 UTYO14607 1347 aa11.13□□□□□ -0.63
MRPS28-207ENST00000521434 SPTBN5Q9NRC6 3674 aaKnown RBP11.13□□□□□ -0.63
MRPS28-207ENST00000521434 ENTPD3O75355 529 aa11.13□□□□□ -0.63
MRPS28-207ENST00000521434 LDHBP07195 334 aaKnown RBP11.13□□□□□ -0.63
MRPS28-207ENST00000521434 PRDX5P30044 214 aa11.13□□□□□ -0.63
MRPS28-207ENST00000521434 GCLCP48506 637 aaPredicted RBP11.13□□□□□ -0.63
MRPS28-207ENST00000521434 RGS3P49796 1198 aa11.13□□□□□ -0.63
MRPS28-207ENST00000521434 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
MRPS28-207ENST00000521434 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
MRPS28-207ENST00000521434 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
MRPS28-207ENST00000521434 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 SLC5A1P13866 664 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 TRIM32Q13049 653 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 GSE1Q14687 1217 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
MRPS28-207ENST00000521434 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
MRPS28-207ENST00000521434 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 IDI2Q9BXS1 227 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 GJD2Q9UKL4 321 aa11.12□□□□□ -0.63
MRPS28-207ENST00000521434 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
MRPS28-207ENST00000521434 PFASO15067 1338 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 WDR63Q8IWG1 891 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 LPIN2Q92539 896 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 GUCD1Q96NT3 240 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.11□□□□□ -0.63
MRPS28-207ENST00000521434 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 FRMPD3Q5JV73 1810 aa11.11□□□□□ -0.63
MRPS28-207ENST00000521434 COL2A1P02458 1487 aaPredicted RBP11.11□□□□□ -0.63
MRPS28-207ENST00000521434 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
MRPS28-207ENST00000521434 DDTLA6NHG4 134 aaPredicted RBP11.1□□□□□ -0.63
MRPS28-207ENST00000521434 SLURP2P0DP57 97 aa11.1□□□□□ -0.63
MRPS28-207ENST00000521434 COL6A1P12109 1028 aa11.1□□□□□ -0.63
MRPS28-207ENST00000521434 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
MRPS28-207ENST00000521434 PABPC4Q13310 644 aaKnown RBP eCLIP11.1□□□□□ -0.635e-6■□□□□ 10.8
MRPS28-207ENST00000521434 MAP3K21Q5TCX8 1036 aa11.1□□□□□ -0.63
MRPS28-207ENST00000521434 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
MRPS28-207ENST00000521434 TRIB2Q92519 343 aa11.1□□□□□ -0.63
MRPS28-207ENST00000521434 GNL3LQ9NVN8 582 aaKnown RBP11.1□□□□□ -0.63
MRPS28-207ENST00000521434 GAKO14976 1311 aa11.09□□□□□ -0.63
MRPS28-207ENST00000521434 MAST2Q6P0Q8 1798 aa11.09□□□□□ -0.63
MRPS28-207ENST00000521434 EYA2O00167 538 aa11.09□□□□□ -0.63
MRPS28-207ENST00000521434 SPP2Q13103 211 aa11.09□□□□□ -0.63
MRPS28-207ENST00000521434 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
MRPS28-207ENST00000521434 PRDM6Q9NQX0 595 aa11.09□□□□□ -0.63
MRPS28-207ENST00000521434 DENND2AQ9ULE3 1009 aa11.09□□□□□ -0.63
MRPS28-207ENST00000521434 SEMA3EO15041 775 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 TBC1D12O60347 775 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
MRPS28-207ENST00000521434 CYP2B6P20813 491 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 HMGCS2P54868 508 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 LRRC26Q2I0M4 334 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
MRPS28-207ENST00000521434 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 SOCS4Q8WXH5 440 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 FAM161BQ96MY7 647 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 NUDT12Q9BQG2 462 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 TBC1D2Q9BYX2 928 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
MRPS28-207ENST00000521434 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
MRPS28-207ENST00000521434 MUC3AQ02505 3323 aa11.07□□□□□ -0.64
MRPS28-207ENST00000521434 PICALMQ13492 652 aa11.07□□□□□ -0.64
MRPS28-207ENST00000521434 ATP2B3Q16720 1220 aa11.07□□□□□ -0.64
MRPS28-207ENST00000521434 DZIP1Q86YF9 867 aaKnown RBP11.07□□□□□ -0.64
MRPS28-207ENST00000521434 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
MRPS28-207ENST00000521434 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
MRPS28-207ENST00000521434 LBHD1Q9BQE6 289 aaPredicted RBP11.07□□□□□ -0.64
MRPS28-207ENST00000521434 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
MRPS28-207ENST00000521434 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
MRPS28-207ENST00000521434 CDH23Q9H251 3354 aa11.07□□□□□ -0.64
MRPS28-207ENST00000521434 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
MRPS28-207ENST00000521434 NCOR1O75376 2440 aa11.06□□□□□ -0.64
MRPS28-207ENST00000521434 ZKSCAN1P17029 563 aaPredicted RBP11.06□□□□□ -0.64
MRPS28-207ENST00000521434 BTDP43251 543 aa11.06□□□□□ -0.64
MRPS28-207ENST00000521434 PHKA1P46020 1223 aa11.06□□□□□ -0.64
MRPS28-207ENST00000521434 RFX5P48382 616 aaPredicted RBP11.06□□□□□ -0.64
MRPS28-207ENST00000521434 CACNB2Q08289 660 aaPredicted RBP11.06□□□□□ -0.64
MRPS28-207ENST00000521434 CCDC184Q52MB2 194 aa11.06□□□□□ -0.64
MRPS28-207ENST00000521434 ATG9AQ7Z3C6 839 aa11.06□□□□□ -0.64
MRPS28-207ENST00000521434 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
MRPS28-207ENST00000521434 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 CAP2P40123 477 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 IRX3P78415 501 aaPredicted RBP11.05□□□□□ -0.64
MRPS28-207ENST00000521434 PDE3AQ14432 1141 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 SH3D19Q5HYK7 790 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 GPRC5AQ8NFJ5 357 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 MAFAQ8NHW3 353 aaPredicted RBP11.05□□□□□ -0.64
MRPS28-207ENST00000521434 CDX2Q99626 313 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms