RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 KNSTRNQ9Y448 316 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 CXCL11O14625 94 aa9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 MIGA2Q7L4E1 593 aa9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 KCNH6Q9H252 994 aa9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 PRDM5Q9NQX1 630 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 ATP11BQ9Y2G3 1177 aa9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 PRRC2BQ5JSZ5 2229 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-227ENST00000521387 TPRP12270 2363 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 A0A0G2JLL6 359 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 PDE8AO60658 829 aa9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 CYP2B6P20813 491 aa9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 AAK1Q2M2I8 961 aa9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 PRRT2Q7Z6L0 340 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 UIMC1Q96RL1 719 aa9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 SLC45A1Q9Y2W3 748 aa9.43□□□□□ -0.9
CTNNA1-227ENST00000521387 IL1R1P14778 569 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 GRIK5Q16478 980 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 FAM110CQ1W6H9 321 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 TRIM60Q495X7 471 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 SLC39A5Q6ZMH5 540 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 SERPINA10Q9UK55 444 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 AK9Q5TCS8 1911 aa9.42□□□□□ -0.9
CTNNA1-227ENST00000521387 ATRXP46100 2492 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 RLFQ13129 1914 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 PLXNA1Q9UIW2 1896 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 TNNI2P48788 182 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 SNX17Q15036 470 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 CCL14Q16627 93 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 GREM2Q9H772 168 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 SUPT16HQ9Y5B9 1047 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 CFAP47Q6ZTR5 3102 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 RIF1Q5UIP0 2472 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 CACNA1HO95180 2353 aa9.41□□□□□ -0.9
CTNNA1-227ENST00000521387 BRWD1Q9NSI6 2320 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 PCCAP05165 728 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 XRCC5P13010 732 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 CRKP46108 304 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 C15orf52Q6ZUT6 534 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 FASTKD5Q7L8L6 764 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 TTLL11Q8NHH1 800 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 SMCR8Q8TEV9 937 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 USP6NLQ92738 828 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 COL26A1Q96A83 441 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 CDC5LQ99459 802 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-227ENST00000521387 TRANK1O15050 2925 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 PER1O15534 1290 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 CNGB1Q14028 1251 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 KRT24Q2M2I5 525 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 TREML2Q5T2D2 321 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 GADL1Q6ZQY3 521 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 C16orf59Q7L2K0 433 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 FAM83AQ86UY5 434 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 PRSS33Q8NF86 280 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 HERVK_113Q902F9 699 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 CHPF2Q9P2E5 772 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 AFG3L2Q9Y4W6 797 aa9.39□□□□□ -0.91
CTNNA1-227ENST00000521387 FRMPD3Q5JV73 1810 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 NCOR2Q9Y618 2525 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 DNM1LO00429 736 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 PEX10O60683 326 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 RGS20O76081 388 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 CTSWP56202 376 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 CC2D1BQ5T0F9 858 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 DCAF15Q66K64 600 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 ERMP1Q7Z2K6 904 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 FAM9BQ8IZU0 186 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.38□□□□□ -0.911e-7■□□□□ 11.3
CTNNA1-227ENST00000521387 YBX2Q9Y2T7 364 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 ZHX2Q9Y6X8 837 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 TRIOO75962 3097 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 SPEF2Q9C093 1822 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 MYO15AQ9UKN7 3530 aa9.38□□□□□ -0.91
CTNNA1-227ENST00000521387 PHF20L1A8MW92 1017 aa9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 KIAA0355O15063 1070 aa9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 TLE2Q04725 743 aa9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 GJC2Q5T442 439 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 LPAR1Q92633 364 aa9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 NKX2-4Q9H2Z4 354 aa9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
CTNNA1-227ENST00000521387 GFRA3O60609 400 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 TAF5LO75529 589 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 ZKSCAN1P17029 563 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 PTPRAP18433 802 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 CHRNDQ07001 517 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms