RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MX1P20591 662 aa24.97■■□□□ 1.59
TRIM35-203ENST00000521253 SMC5Q8IY18 1101 aa24.97■■□□□ 1.59
TRIM35-203ENST00000521253 PI4K2BQ8TCG2 481 aa24.97■■□□□ 1.59
TRIM35-203ENST00000521253 CFHR5Q9BXR6 569 aa24.97■■□□□ 1.59
TRIM35-203ENST00000521253 HERC5Q9UII4 1024 aaKnown RBP24.97■■□□□ 1.59
TRIM35-203ENST00000521253 LAMB1P07942 1786 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 SNAPC2Q13487 334 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 UBE3CQ15386 1083 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 SLC4A8Q2Y0W8 1093 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 OTUD7BQ6GQQ9 843 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 LCORLQ8N3X6 602 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 R3HDMLQ9H3Y0 253 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 PICK1Q9NRD5 415 aa24.96■■□□□ 1.59
TRIM35-203ENST00000521253 ERC2O15083 957 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 PTPRAP18433 802 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 ZSCAN25Q6NSZ9 544 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 METTL16Q86W50 562 aaKnown RBP24.95■■□□□ 1.58
TRIM35-203ENST00000521253 KBTBD3Q8NAB2 608 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 CRNKL1Q9BZJ0 848 aaKnown RBP24.95■■□□□ 1.58
TRIM35-203ENST00000521253 ARMT1Q9H993 441 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 CDK5RAP2Q96SN8 1893 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 FOCADQ5VW36 1801 aa24.95■■□□□ 1.58
TRIM35-203ENST00000521253 GLRX3O76003 335 aaKnown RBP24.94■■□□□ 1.58
TRIM35-203ENST00000521253 MBD4O95243 580 aa24.94■■□□□ 1.58
TRIM35-203ENST00000521253 HLA-DOAP06340 250 aa24.94■■□□□ 1.58
TRIM35-203ENST00000521253 CETPP11597 493 aa24.94■■□□□ 1.58
TRIM35-203ENST00000521253 RRP1BQ14684 758 aaKnown RBP24.94■■□□□ 1.58
TRIM35-203ENST00000521253 FOXP4Q8IVH2 680 aaPredicted RBP24.94■■□□□ 1.58
TRIM35-203ENST00000521253 DNAJC18Q9H819 358 aa24.94■■□□□ 1.58
TRIM35-203ENST00000521253 KCNH4Q9UQ05 1017 aa24.94■■□□□ 1.58
TRIM35-203ENST00000521253 ZHX2Q9Y6X8 837 aa24.94■■□□□ 1.58
TRIM35-203ENST00000521253 B4GALNT3Q6L9W6 998 aa24.93■■□□□ 1.58
TRIM35-203ENST00000521253 CRACR2BQ8N4Y2 399 aaPredicted RBP24.93■■□□□ 1.58
TRIM35-203ENST00000521253 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.93■■□□□ 1.58
TRIM35-203ENST00000521253 SIPA1L1O43166 1804 aa24.92■■□□□ 1.58
TRIM35-203ENST00000521253 GPR25O00155 361 aa24.92■■□□□ 1.58
TRIM35-203ENST00000521253 FAM43AQ8N2R8 423 aa24.92■■□□□ 1.58
TRIM35-203ENST00000521253 SDR42E1Q8WUS8 393 aa24.92■■□□□ 1.58
TRIM35-203ENST00000521253 TRIM34Q9BYJ4 488 aa24.92■■□□□ 1.58
TRIM35-203ENST00000521253 LNPKQ9C0E8 428 aa24.92■■□□□ 1.58
TRIM35-203ENST00000521253 CASP8AP2Q9UKL3 1982 aa24.91■■□□□ 1.58
TRIM35-203ENST00000521253 CAP2P40123 477 aa24.91■■□□□ 1.58
TRIM35-203ENST00000521253 CCDC84Q86UT8 332 aaPredicted RBP24.91■■□□□ 1.58
TRIM35-203ENST00000521253 PUS7LQ9H0K6 701 aaKnown RBP24.91■■□□□ 1.58
TRIM35-203ENST00000521253 STAP2Q9UGK3 403 aa24.91■■□□□ 1.58
TRIM35-203ENST00000521253 BTBD19C9JJ37 291 aa24.9■■□□□ 1.58
TRIM35-203ENST00000521253 CXCL11O14625 94 aa24.9■■□□□ 1.58
TRIM35-203ENST00000521253 PRKAB2O43741 272 aa24.9■■□□□ 1.58
TRIM35-203ENST00000521253 CRHR2Q13324 411 aa24.9■■□□□ 1.58
TRIM35-203ENST00000521253 NOM1Q5C9Z4 860 aaKnown RBP24.9■■□□□ 1.58
TRIM35-203ENST00000521253 ZNF296Q8WUU4 475 aaPredicted RBP24.9■■□□□ 1.58
TRIM35-203ENST00000521253 DCP1AQ9NPI6 582 aaPredicted RBP24.9■■□□□ 1.58
TRIM35-203ENST00000521253 AFG3L2Q9Y4W6 797 aa24.9■■□□□ 1.58
TRIM35-203ENST00000521253 RNF113AO15541 343 aaKnown RBP24.89■■□□□ 1.58
TRIM35-203ENST00000521253 PDE1AP54750 535 aa24.89■■□□□ 1.58
TRIM35-203ENST00000521253 MOGSQ13724 837 aa24.89■■□□□ 1.58
TRIM35-203ENST00000521253 TTC6Q86TZ1 520 aa24.89■■□□□ 1.58
TRIM35-203ENST00000521253 EHD4Q9H223 541 aa24.89■■□□□ 1.58
TRIM35-203ENST00000521253 MCM9Q9NXL9 1143 aa24.89■■□□□ 1.58
TRIM35-203ENST00000521253 DOCK1Q14185 1865 aa24.88■■□□□ 1.57
TRIM35-203ENST00000521253 POLR3DP05423 398 aaPredicted RBP24.88■■□□□ 1.57
TRIM35-203ENST00000521253 PLCD1P51178 756 aa24.88■■□□□ 1.57
TRIM35-203ENST00000521253 NUCB1Q02818 461 aa24.88■■□□□ 1.57
TRIM35-203ENST00000521253 CHD1LQ86WJ1 897 aa24.88■■□□□ 1.57
TRIM35-203ENST00000521253 SERPINB13Q9UIV8 391 aa24.88■■□□□ 1.57
TRIM35-203ENST00000521253 ZFYP08048 801 aaPredicted RBP24.87■■□□□ 1.57
TRIM35-203ENST00000521253 JAG1P78504 1218 aa24.87■■□□□ 1.57
TRIM35-203ENST00000521253 TAF1CQ15572 869 aaPredicted RBP24.87■■□□□ 1.57
TRIM35-203ENST00000521253 APPBP2Q92624 585 aa24.87■■□□□ 1.57
TRIM35-203ENST00000521253 OSBP2Q969R2 916 aa24.87■■□□□ 1.57
TRIM35-203ENST00000521253 ZCCHC17Q9NP64 241 aaKnown RBP24.87■■□□□ 1.57
TRIM35-203ENST00000521253 ATP8A2Q9NTI2 1148 aa24.87■■□□□ 1.57
TRIM35-203ENST00000521253 A0A0G2JLL6 359 aaPredicted RBP24.86■■□□□ 1.57
TRIM35-203ENST00000521253 TRIM75PA6NK02 468 aa24.86■■□□□ 1.57
TRIM35-203ENST00000521253 GDF11O95390 407 aa24.86■■□□□ 1.57
TRIM35-203ENST00000521253 EVX2Q03828 476 aa24.86■■□□□ 1.57
TRIM35-203ENST00000521253 SHROOM1Q2M3G4 852 aaPredicted RBP24.86■■□□□ 1.57
TRIM35-203ENST00000521253 PRRT2Q7Z6L0 340 aaPredicted RBP24.86■■□□□ 1.57
TRIM35-203ENST00000521253 FSD1Q9BTV5 496 aa24.86■■□□□ 1.57
TRIM35-203ENST00000521253 SLC4A4Q9Y6R1 1079 aa24.86■■□□□ 1.57
TRIM35-203ENST00000521253 MYH7P12883 1935 aa24.86■■□□□ 1.57
TRIM35-203ENST00000521253 DDX60LQ5H9U9 1706 aaKnown RBP24.86■■□□□ 1.57
TRIM35-203ENST00000521253 MYH1P12882 1939 aa24.85■■□□□ 1.57
TRIM35-203ENST00000521253 FKTNO75072 461 aa24.85■■□□□ 1.57
TRIM35-203ENST00000521253 TATDN1Q6P1N9 297 aa24.85■■□□□ 1.57
TRIM35-203ENST00000521253 ANKRD23Q86SG2 305 aa24.85■■□□□ 1.57
TRIM35-203ENST00000521253 STRBPQ96SI9 672 aaKnown RBP24.85■■□□□ 1.57
TRIM35-203ENST00000521253 ZFYVE28Q9HCC9 887 aa24.85■■□□□ 1.57
TRIM35-203ENST00000521253 USP17L5A8MUK1 530 aa24.84■■□□□ 1.57
TRIM35-203ENST00000521253 ASNSP08243 561 aa24.84■■□□□ 1.57
TRIM35-203ENST00000521253 CYP2D6P10635 497 aa24.84■■□□□ 1.57
TRIM35-203ENST00000521253 DGKZQ13574 1117 aa24.84■■□□□ 1.57
TRIM35-203ENST00000521253 LRRFIP1Q32MZ4 808 aaKnown RBP24.84■■□□□ 1.57
TRIM35-203ENST00000521253 NAV1Q8NEY1 1877 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 PDHXO00330 501 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 GABPAQ06546 454 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 SPP2Q13103 211 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 GPAT2Q6NUI2 795 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 FASTKD5Q7L8L6 764 aaKnown RBP24.83■■□□□ 1.57
TRIM35-203ENST00000521253 CTU1Q7Z7A3 348 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms