RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
PVT1-210ENST00000521122 PNMA3Q9UL41 463 aa11.43□□□□□ -0.58
PVT1-210ENST00000521122 YBX2Q9Y2T7 364 aaKnown RBP11.43□□□□□ -0.58
PVT1-210ENST00000521122 PTPRFP10586 1907 aa11.43□□□□□ -0.58
PVT1-210ENST00000521122 GBF1Q92538 1859 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 PDE8AO60658 829 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.586e-6■■■■□ 25.1
PVT1-210ENST00000521122 CCL14Q16627 93 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 AMER1Q5JTC6 1135 aaPredicted RBP11.42□□□□□ -0.58
PVT1-210ENST00000521122 TMEM240Q5SV17 173 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 GJC2Q5T442 439 aaPredicted RBP11.42□□□□□ -0.58
PVT1-210ENST00000521122 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 AGTPBP1Q9UPW5 1226 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 TECTAO75443 2155 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 PLXNA3P51805 1871 aa11.42□□□□□ -0.58
PVT1-210ENST00000521122 GAKO14976 1311 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 PROB1E7EW31 1015 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 IL1R1P14778 569 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 CACNB3P54284 484 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 PPP2R2DQ66LE6 453 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
PVT1-210ENST00000521122 ASCL5Q7RTU5 278 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 USP6NLQ92738 828 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 IRF2BPLQ9H1B7 796 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 TTF2Q9UNY4 1162 aaKnown RBP11.41□□□□□ -0.58
PVT1-210ENST00000521122 SPEF2Q9C093 1822 aa11.41□□□□□ -0.58
PVT1-210ENST00000521122 CRKP46108 304 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 ARRDC4Q8NCT1 418 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 JAG2Q9Y219 1238 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
PVT1-210ENST00000521122 RGS2P41220 211 aa11.39□□□□□ -0.59
PVT1-210ENST00000521122 PKN1Q16512 942 aa11.39□□□□□ -0.59
PVT1-210ENST00000521122 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
PVT1-210ENST00000521122 ANKRD2Q9GZV1 360 aa11.39□□□□□ -0.59
PVT1-210ENST00000521122 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
PVT1-210ENST00000521122 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
PVT1-210ENST00000521122 UTYO14607 1347 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 ZNF521Q96K83 1311 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 PRR23AA6NEV1 266 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 SLC5A1P13866 664 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 PPIGQ13427 754 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■□□□ 11.4
PVT1-210ENST00000521122 TREML2Q5T2D2 321 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 KRT40Q6A162 431 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 C15orf52Q6ZUT6 534 aaKnown RBP11.38□□□□□ -0.59
PVT1-210ENST00000521122 DGLUCYQ7Z3D6 616 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 APBA2Q99767 749 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 ALG13Q9NP73 1137 aaKnown RBP11.38□□□□□ -0.59
PVT1-210ENST00000521122 TMEM39AQ9NV64 488 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 MORF4L1Q9UBU8 362 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
PVT1-210ENST00000521122 SPTBN2O15020 2390 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 RFXAPO00287 272 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 PTPRAP18433 802 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 CNGA1P29973 690 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 KCNJ4P48050 445 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 ST3GAL2Q16842 350 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 MFSD5Q6N075 450 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 PSRC1Q6PGN9 363 aaPredicted RBP11.37□□□□□ -0.59
PVT1-210ENST00000521122 BMP8AQ7Z5Y6 402 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
PVT1-210ENST00000521122 TMOD2Q9NZR1 351 aa11.37□□□□□ -0.59
PVT1-210ENST00000521122 EP300Q09472 2414 aaPredicted RBP11.36□□□□□ -0.59
PVT1-210ENST00000521122 TIMP1P01033 207 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 IL9P15248 144 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 LEXMQ3ZCV2 418 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 EPHA10Q5JZY3 1008 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 ZNF365Q70YC5 407 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 TDRD7Q8NHU6 1098 aaKnown RBP11.36□□□□□ -0.59
PVT1-210ENST00000521122 FERMT2Q96AC1 680 aa11.36□□□□□ -0.59
PVT1-210ENST00000521122 CEP250Q9BV73 2442 aa11.35□□□□□ -0.59
PVT1-210ENST00000521122 PQBP1O60828 265 aaKnown RBP11.35□□□□□ -0.59
PVT1-210ENST00000521122 PCCAP05165 728 aaPredicted RBP11.35□□□□□ -0.59
PVT1-210ENST00000521122 MORN1Q5T089 497 aa11.35□□□□□ -0.59
PVT1-210ENST00000521122 SCYL3Q8IZE3 742 aa11.35□□□□□ -0.59
PVT1-210ENST00000521122 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.35□□□□□ -0.59
PVT1-210ENST00000521122 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
PVT1-210ENST00000521122 KMT2EQ8IZD2 1858 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 TRIM75PA6NK02 468 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 MAPK4P31152 587 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 CTSWP56202 376 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
PVT1-210ENST00000521122 MTIF3Q9H2K0 278 aaKnown RBP11.34□□□□□ -0.59
PVT1-210ENST00000521122 GREM2Q9H772 168 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
PVT1-210ENST00000521122 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
PVT1-210ENST00000521122 PCDHA11Q9Y5I1 949 aa11.34□□□□□ -0.59
PVT1-210ENST00000521122 PHIPQ8WWQ0 1821 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms