RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PNMA6FA0A0J9YX94 578 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 DCDC2CA8MYV0 355 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 TRIM37O94972 964 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 BMP6P22004 513 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 AFMP43652 599 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 MLANAQ16655 118 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 NKPD1Q17RQ9 610 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 TPTE2Q6XPS3 522 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 KCT2Q8NC54 265 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 GRIN3AQ8TCU5 1115 aa8.14□□□□□ -1.11
CLK4-207ENST00000520909 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
CLK4-207ENST00000520909 ZNF503-AS2A6NEH8 195 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 SOWAHDA6NJG2 315 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 GSTT1P30711 240 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 NTF4P34130 210 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 CLCN7P51798 805 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 RING1Q06587 406 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 C3orf58Q8NDZ4 430 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLK4-207ENST00000520909 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 DCTN4Q9UJW0 460 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 CTNND2Q9UQB3 1225 aa8.13□□□□□ -1.11
CLK4-207ENST00000520909 DSC3Q14574 896 aa8.12□□□□□ -1.11
CLK4-207ENST00000520909 LRRC14Q15048 493 aa8.12□□□□□ -1.11
CLK4-207ENST00000520909 ENOX2Q16206 610 aaKnown RBP8.12□□□□□ -1.11
CLK4-207ENST00000520909 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
CLK4-207ENST00000520909 KRTAP19-4Q3LI73 84 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 ZBTB37Q5TC79 503 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 SCARA3Q6AZY7 606 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 C14orf37Q86TY3 774 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 FOXQ1Q9C009 403 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 SRCIN1Q9C0H9 1055 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
CLK4-207ENST00000520909 ENC1O14682 589 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 EOMESO95936 686 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 RAP1GAPP47736 663 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 UBE3DQ7Z6J8 389 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 ZNF507Q8TCN5 953 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 ELMO3Q96BJ8 720 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 PITPNM2Q9BZ72 1349 aa8.1□□□□□ -1.11
CLK4-207ENST00000520909 TREHO43280 583 aa8.09□□□□□ -1.11
CLK4-207ENST00000520909 PAGE1O75459 146 aa8.09□□□□□ -1.11
CLK4-207ENST00000520909 LRIG2O94898 1065 aa8.09□□□□□ -1.11
CLK4-207ENST00000520909 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
CLK4-207ENST00000520909 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
CLK4-207ENST00000520909 LIN37Q96GY3 246 aaPredicted RBP8.09□□□□□ -1.11
CLK4-207ENST00000520909 CYP8B1Q9UNU6 501 aa8.09□□□□□ -1.11
CLK4-207ENST00000520909 FAM155AB1AL88 458 aaPredicted RBP8.08□□□□□ -1.12
CLK4-207ENST00000520909 MAPK1P28482 360 aa8.08□□□□□ -1.12
CLK4-207ENST00000520909 FYB2Q5VWT5 728 aa8.08□□□□□ -1.12
CLK4-207ENST00000520909 CYFIP1Q7L576 1253 aa8.08□□□□□ -1.12
CLK4-207ENST00000520909 TOX2Q96NM4 488 aa8.08□□□□□ -1.12
CLK4-207ENST00000520909 PPP1R16BQ96T49 567 aa8.08□□□□□ -1.12
CLK4-207ENST00000520909 FBXO24O75426 580 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 GLI1P08151 1106 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 TMEM67Q5HYA8 995 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 FBF1Q8TES7 1133 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 KIRREL1Q96J84 757 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 HSPA12BQ96MM6 686 aa8.07□□□□□ -1.12
CLK4-207ENST00000520909 CARS2Q9HA77 564 aaKnown RBP8.07□□□□□ -1.12
CLK4-207ENST00000520909 TPX2Q9ULW0 747 aaKnown RBP8.07□□□□□ -1.12
CLK4-207ENST00000520909 GIPC1O14908 333 aa8.06□□□□□ -1.12
CLK4-207ENST00000520909 SFRP5Q5T4F7 317 aa8.06□□□□□ -1.12
CLK4-207ENST00000520909 NPAS4Q8IUM7 802 aa8.06□□□□□ -1.12
CLK4-207ENST00000520909 SLITRK5O94991 958 aa8.05□□□□□ -1.12
CLK4-207ENST00000520909 CDKAL1Q5VV42 579 aa8.05□□□□□ -1.12
CLK4-207ENST00000520909 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
CLK4-207ENST00000520909 ATP13A1Q9HD20 1204 aa8.05□□□□□ -1.12
CLK4-207ENST00000520909 SEMA3GQ9NS98 782 aa8.05□□□□□ -1.12
CLK4-207ENST00000520909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
CLK4-207ENST00000520909 TSPAN15O95858 294 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 MAPK8P45983 427 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 INPP5AQ14642 412 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 LCE5AQ5TCM9 118 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 RASIP1Q5U651 963 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 PRR23BQ6ZRT6 265 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 SYDE1Q6ZW31 735 aaPredicted RBP8.04□□□□□ -1.12
CLK4-207ENST00000520909 HDXQ7Z353 690 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 ANKLE2Q86XL3 938 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 ZSCAN18Q8TBC5 510 aaPredicted RBP8.04□□□□□ -1.12
CLK4-207ENST00000520909 ANKRD24Q8TF21 1146 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 ARID3AQ99856 593 aa8.04□□□□□ -1.12
CLK4-207ENST00000520909 GNEQ9Y223 722 aaKnown RBP8.04□□□□□ -1.12
CLK4-207ENST00000520909 PRAMEF27A3QJZ7 478 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 CFPP27918 469 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 GDNFP39905 211 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 ALG1LQ6GMV1 187 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 MFSD4AQ8N468 514 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 MFSD2AQ8NA29 543 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 CCDC120Q96HB5 630 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 MIPEPQ99797 713 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 ZNF865P0CJ78 1059 aaPredicted RBP8.03□□□□□ -1.12
CLK4-207ENST00000520909 PCNX4Q63HM2 1172 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms