RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 LDHCP07864 332 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 LIFRP42702 1097 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
CLK4-206ENST00000520878 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 YEATS4O95619 227 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 AFMP43652 599 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 ZNF174Q15697 407 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 ALX1Q15699 326 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 NRBP1Q9UHY1 535 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 ROBO1Q9Y6N7 1651 aa13.07□□□□□ -0.32
CLK4-206ENST00000520878 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
CLK4-206ENST00000520878 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLK4-206ENST00000520878 TPD52L1Q16890 204 aaPredicted RBP13.06□□□□□ -0.32
CLK4-206ENST00000520878 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 STAG1Q8WVM7 1258 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLK4-206ENST00000520878 BAZ2BQ9UIF8 2168 aaKnown RBP13.06□□□□□ -0.32
CLK4-206ENST00000520878 GTF2IP78347 998 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 EVX2Q03828 476 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 LRMPQ12912 555 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 MFSD14BQ5SR56 506 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 ZSCAN29Q8IWY8 852 aaPredicted RBP13.06□□□□□ -0.32
CLK4-206ENST00000520878 TEX11Q8IYF3 940 aa13.06□□□□□ -0.32
CLK4-206ENST00000520878 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
CLK4-206ENST00000520878 ZC3H12CQ9C0D7 883 aaKnown RBP13.06□□□□□ -0.32
CLK4-206ENST00000520878 IFNAR1P17181 557 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 UQCRHP07919 91 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 PNOCQ13519 176 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 SLC44A5Q8NCS7 719 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 DHX58Q96C10 678 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 POLR3EQ9NVU0 708 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 KCNH3Q9ULD8 1083 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 STAMQ92783 540 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 DCP1AQ9NPI6 582 aaPredicted RBP13.05□□□□□ -0.32
CLK4-206ENST00000520878 KIAA1468Q9P260 1216 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
CLK4-206ENST00000520878 MARCH6O60337 910 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
CLK4-206ENST00000520878 GRAPQ13588 217 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
CLK4-206ENST00000520878 SGMS1Q86VZ5 419 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
CLK4-206ENST00000520878 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
CLK4-206ENST00000520878 TPM3P06753 285 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 GSTO1P78417 241 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 DPCR1Q3MIW9 517 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 CEP131Q9UPN4 1083 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 AP5Z1O43299 807 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 OFD1O75665 1012 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 WDHD1O75717 1129 aaPredicted RBP13.04□□□□□ -0.32
CLK4-206ENST00000520878 APBA3O96018 575 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 KIF5BP33176 963 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 MCM7P33993 719 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 KRT2P35908 639 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 ZNF75DP51815 510 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
CLK4-206ENST00000520878 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
CLK4-206ENST00000520878 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 TMC6Q7Z403 805 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
CLK4-206ENST00000520878 XDHP47989 1333 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 TRIM34Q9BYJ4 488 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 IFNKQ9P0W0 207 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 VWA3AA6NCI4 1184 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 CMA1P23946 247 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 DHX8Q14562 1220 aaKnown RBP13.03□□□□□ -0.32
CLK4-206ENST00000520878 PTPN21Q16825 1174 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 GPKOWQ92917 476 aaPredicted RBP eCLIP13.03□□□□□ -0.324e-6■■■■□ 25.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms