RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	HSP90B1	P14625	803 aa	Known RBP	10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	ATP5J	P18859	108 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	RGS19	P49795	217 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	TYRO3	Q06418	890 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	CCDC152	Q4G0S7	254 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	ASTL	Q6HA08	431 aa	Predicted RBP	10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	EFCAB3	Q8N7B9	438 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	SUCLG2	Q96I99	432 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	CSRNP1	Q96S65	589 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	MXD3	Q9BW11	206 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	CLSTN2	Q9H4D0	955 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	BICC1	Q9H694	974 aa	Known RBP	10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	AKAP11	Q9UKA4	1901 aa		10.09	□□□□□ -0.79
CTNNA1-223	ENST00000520520	MYH15	Q9Y2K3	1946 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	WTIP	A6NIX2	430 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NEMF	O60524	1076 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CDC25B	P30305	580 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ATN1	P54259	1190 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PRKG1	Q13976	671 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	GIMAP6	Q6P9H5	292 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	RASAL3	Q86YV0	1011 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ANKRD18A	Q8IVF6	992 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	BICD2	Q8TD16	824 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	GTF3C6	Q969F1	213 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ZNF396	Q96N95	335 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	MYOZ2	Q9NPC6	264 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	COPRS	Q9NQ92	184 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TPCN1	Q9ULQ1	816 aa		10.08	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TCHH	Q07283	1943 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NEURL1B	A8MQ27	555 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	GOLGA6L19	H0YKK7	550 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	UBE2Q2L	H0YL09	131 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PDE8A	O60658	829 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SASH1	O94885	1247 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	USP17L8	P0C7I0	530 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	FGD1	P98174	961 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	RBM10	P98175	930 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CWF19L2	Q2TBE0	894 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ADCK5	Q3MIX3	580 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NAA16	Q6N069	864 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CCDC73	Q6ZRK6	1079 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	RBM43	Q6ZSC3	357 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NEK1	Q96PY6	1258 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	METTL22	Q9BUU2	404 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CCDC94	Q9BW85	323 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CWC25	Q9NXE8	425 aa	Predicted RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SAGE1	Q9NXZ1	904 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	HDAC9	Q9UKV0	1011 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PA2G4	Q9UQ80	394 aa	Known RBP	10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520	XDH	P47989	1333 aa		10.07	□□□□□ -0.8
CTNNA1-223	ENST00000520520		A0A0D9SFI3	127 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	USP17L3	A6NCW0	530 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	USP17L4	A6NCW7	530 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TBC1D8	O95759	1140 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PCCA	P05165	728 aa	Predicted RBP	10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CPA1	P15085	419 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	GCKR	Q14397	625 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SYCP1	Q15431	976 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	STX1A	Q16623	288 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NBPF9	Q3BBW0	867 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	USP17L1	Q7RTZ2	530 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TTC6	Q86TZ1	520 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	DRC7	Q8IY82	874 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NECAB1	Q8N987	351 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	AGBL3	Q8NEM8	1001 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TDRD7	Q8NHU6	1098 aa	Known RBP	10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	KIAA1524	Q8TCG1	905 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	LEO1	Q8WVC0	666 aa	Predicted RBP	10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	EAF2	Q96CJ1	260 aa	Predicted RBP	10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	FAM227B	Q96M60	508 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	MFRP	Q9BY79	579 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PODXL2	Q9NZ53	605 aa		10.06	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NRDC	O43847	1150 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TAF5L	O75529	589 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ATP2B4	P23634	1241 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ZNF280A	P59817	542 aa	Predicted RBP	10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TPM4	P67936	248 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ST3GAL1	Q11201	340 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TRIM28	Q13263	835 aa	Known RBP	10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	MCMDC2	Q4G0Z9	681 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TNNI3K	Q59H18	835 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CTU1	Q7Z7A3	348 aa	Known RBP	10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CCDC191	Q8NCU4	936 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PKNOX2	Q96KN3	472 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NAT10	Q9H0A0	1025 aa	Known RBP	10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	BOLA2	Q9H3K6	86 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TTC12	Q9H892	705 aa	Predicted RBP	10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	GPR108	Q9NPR9	543 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	HELLS	Q9NRZ9	838 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	MRVI1	Q9Y6F6	885 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	FPGT-TNNI3K	V9GXZ4	949 aa		10.05	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PAPPA2	Q9BXP8	1791 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	KIF2A	O00139	706 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	KIN	O60870	393 aa	Known RBP	10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CTSW	P56202	376 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	REST	Q13127	1097 aa		10.04	□□□□□ -0.8

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