RNA–Protein interactions for RNA: ENST00000520178.3

CNOT7-208, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 5

Gene CNOT7, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-208	ENST00000520178	IFIT1	P09914	478 aa	Known RBP	13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	CYP2B6	P20813	491 aa		13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	CACNB2	Q08289	660 aa	Predicted RBP	13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	PUM3	Q15397	648 aa	Known RBP	13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	CCDC27	Q2M243	656 aa		13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	RABL6	Q3YEC7	729 aa	Predicted RBP	13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	LRRC24	Q50LG9	513 aa		13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	SH3BP5L	Q7L8J4	393 aa		13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	IL16	Q14005	1332 aa		13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	SALL1	Q9NSC2	1324 aa		13.58	□□□□□ -0.24
CNOT7-208	ENST00000520178	PLXNA1	Q9UIW2	1896 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	TBC1D12	O60347	775 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZKSCAN1	P17029	563 aa	Predicted RBP	13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	PRDX5	P30044	214 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZEB1	P37275	1124 aa	Predicted RBP	13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	USP6NL	Q92738	828 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	FAM122A	Q96E09	287 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	SUCLG2	Q96I99	432 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	PRKAG2	Q9UGJ0	569 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	SMCHD1	A6NHR9	2005 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	UTY	O14607	1347 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	GAK	O14976	1311 aa		13.57	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	TCF20	Q9UGU0	1960 aa	Known RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	DDTL	A6NHG4	134 aa	Predicted RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZBTB22	O15209	634 aa		13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	LDHB	P07195	334 aa	Known RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	CCND3	P30281	292 aa	Predicted RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	HOXD11	P31277	338 aa	Predicted RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	SHH	Q15465	462 aa		13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	SH3D19	Q5HYK7	790 aa		13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZNF280C	Q8ND82	737 aa		13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.56	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZNF236	Q9UL36	1845 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	GBF1	Q92538	1859 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	VAMP4	O75379	141 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	MAPK4	P31152	587 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	HMGCS2	P54868	508 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	SPP2	Q13103	211 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	PDE3A	Q14432	1141 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	CCDC84	Q86UT8	332 aa	Predicted RBP	13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	RAPGEFL1	Q9UHV5	662 aa		13.55	□□□□□ -0.24
CNOT7-208	ENST00000520178	NPM3	O75607	178 aa	Known RBP	13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	SLC5A1	P13866	664 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	RGS2	P41220	211 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	C9orf50	Q5SZB4	431 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	WWC1	Q8IX03	1113 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	LPIN2	Q92539	896 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	APBA2	Q99767	749 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	SRCIN1	Q9C0H9	1055 aa		13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	BICC1	Q9H694	974 aa	Known RBP	13.54	□□□□□ -0.24
CNOT7-208	ENST00000520178	CHD9	Q3L8U1	2897 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	DNM1L	O00429	736 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	MSC	O60682	206 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	HOXA7	P31268	230 aa	Predicted RBP	13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	RTP1	P59025	263 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	MORN1	Q5T089	497 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	ANKRD44	Q8N8A2	993 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	GPRC5A	Q8NFJ5	357 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	FANCI	Q9NVI1	1328 aa		13.53	□□□□□ -0.24
CNOT7-208	ENST00000520178	SEMA3E	O15041	775 aa		13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	SLURP2	P0DP57	97 aa		13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	IRX3	P78415	501 aa	Predicted RBP	13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	CCL14	Q16627	93 aa		13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	NCBP3	Q53F19	620 aa	Known RBP	13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	ZGPAT	Q8N5A5	531 aa	Known RBP	13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	LPAR1	Q92633	364 aa		13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	FAM163A	Q96GL9	167 aa	Predicted RBP	13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	DDX4	Q9NQI0	724 aa	Known RBP	13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	MUC6	Q6W4X9	2439 aa		13.52	□□□□□ -0.25
CNOT7-208	ENST00000520178	SYNGAP1	Q96PV0	1343 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	USP17L5	A8MUK1	530 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	HERVK_113	P62684	666 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	SNX17	Q15036	470 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	GPR142	Q7Z601	462 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	SLF2	Q8IX21	1173 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	USP38	Q8NB14	1042 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	WDR18	Q9BV38	432 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	AS3MT	Q9HBK9	375 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	TXNRD2	Q9NNW7	524 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	GNL3L	Q9NVN8	582 aa	Known RBP	13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	DDX20	Q9UHI6	824 aa	Known RBP	13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	DENND2A	Q9ULE3	1009 aa		13.51	□□□□□ -0.25
CNOT7-208	ENST00000520178	REV3L	O60673	3130 aa		13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	CAP2	P40123	477 aa		13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	ATN1	P54259	1190 aa	Predicted RBP	13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	ERVK-9	P63128	1117 aa		13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	ERVK-24	P63145	666 aa		13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	MAP3K12	Q12852	859 aa		13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	PLEKHH3	Q7Z736	793 aa		13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	P2RX7	Q99572	595 aa	Known RBP	13.5	□□□□□ -0.25
CNOT7-208	ENST00000520178	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms