RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 PROCA1Q8NCQ7 364 aaPredicted RBP14.53□□□□□ -0.08
POLB-208ENST00000520008 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
POLB-208ENST00000520008 SSH3Q8TE77 659 aa14.53□□□□□ -0.08
POLB-208ENST00000520008 FRAT1Q92837 279 aaPredicted RBP14.53□□□□□ -0.08
POLB-208ENST00000520008 CLUAP1Q96AJ1 413 aa14.53□□□□□ -0.08
POLB-208ENST00000520008 RANBP2P49792 3224 aaKnown RBP14.52□□□□□ -0.08
POLB-208ENST00000520008 UQCRFS1P1P0C7P4 283 aa14.52□□□□□ -0.09
POLB-208ENST00000520008 CCL5P13501 91 aa14.52□□□□□ -0.09
POLB-208ENST00000520008 FXR1P51114 621 aaKnown RBP eCLIP14.52□□□□□ -0.09
POLB-208ENST00000520008 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.09
POLB-208ENST00000520008 GORABQ5T7V8 394 aa14.52□□□□□ -0.09
POLB-208ENST00000520008 NKX2-3Q8TAU0 364 aa14.52□□□□□ -0.09
POLB-208ENST00000520008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.52□□□□□ -0.09
POLB-208ENST00000520008 RAI14Q9P0K7 980 aa14.52□□□□□ -0.09
POLB-208ENST00000520008 CEP290O15078 2479 aa14.52□□□□□ -0.09
POLB-208ENST00000520008 CAP2P40123 477 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 FLT3LGP49771 235 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
POLB-208ENST00000520008 IRF5Q13568 498 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 FAM110CQ1W6H9 321 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 ZKSCAN2Q63HK3 967 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 ADGRA1Q86SQ6 560 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 PXYLP1Q8TE99 480 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 SMCR8Q8TEV9 937 aaPredicted RBP14.51□□□□□ -0.09
POLB-208ENST00000520008 ZNF512BQ96KM6 892 aaPredicted RBP14.51□□□□□ -0.09
POLB-208ENST00000520008 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 HERC5Q9UII4 1024 aaKnown RBP14.51□□□□□ -0.09
POLB-208ENST00000520008 COLQQ9Y215 455 aaPredicted RBP14.51□□□□□ -0.09
POLB-208ENST00000520008 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 SZT2Q5T011 3432 aa14.51□□□□□ -0.09
POLB-208ENST00000520008 H0YGN5 161 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 ADCY3O60266 1144 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 PPP4CP60510 307 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 UBXN2AP68543 259 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 SH3D19Q5HYK7 790 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
POLB-208ENST00000520008 TEX11Q8IYF3 940 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 ZNF280CQ8ND82 737 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 SH3RF3Q8TEJ3 882 aaPredicted RBP14.5□□□□□ -0.09
POLB-208ENST00000520008 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 RNF208Q9H0X6 261 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 PLXNB2O15031 1838 aa14.5□□□□□ -0.09
POLB-208ENST00000520008 DOCK3Q8IZD9 2030 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 TNPO2O14787 897 aaKnown RBP14.49□□□□□ -0.09
POLB-208ENST00000520008 IGSF3O75054 1194 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 CYP2E1P05181 493 aaPredicted RBP14.49□□□□□ -0.09
POLB-208ENST00000520008 ATP8B2P98198 1209 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 SPP2Q13103 211 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 U2AF1L4Q8WU68 220 aaKnown RBP14.49□□□□□ -0.09
POLB-208ENST00000520008 UNC93B1Q9H1C4 597 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
POLB-208ENST00000520008 PNMA3Q9UL41 463 aa14.49□□□□□ -0.09
POLB-208ENST00000520008 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
POLB-208ENST00000520008 FLT1P17948 1338 aa14.48□□□□□ -0.09
POLB-208ENST00000520008 INHAP05111 366 aa14.48□□□□□ -0.09
POLB-208ENST00000520008 ELNP15502 786 aa14.48□□□□□ -0.09
POLB-208ENST00000520008 HMGCS2P54868 508 aa14.48□□□□□ -0.09
POLB-208ENST00000520008 NAA16Q6N069 864 aaPredicted RBP14.48□□□□□ -0.09
POLB-208ENST00000520008 PAK6Q9NQU5 681 aaPredicted RBP14.48□□□□□ -0.09
POLB-208ENST00000520008 SNRKQ9NRH2 765 aa14.48□□□□□ -0.09
POLB-208ENST00000520008 AATFQ9NY61 560 aaKnown RBP eCLIP14.48□□□□□ -0.09
POLB-208ENST00000520008 PI4KBQ9UBF8 816 aa14.48□□□□□ -0.09
POLB-208ENST00000520008 DBNLQ9UJU6 430 aaKnown RBP14.48□□□□□ -0.09
POLB-208ENST00000520008 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
POLB-208ENST00000520008 USP17L5A8MUK1 530 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 SGPL1O95470 568 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 RLBP1P12271 317 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 PLCG2P16885 1265 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 GCLCP48506 637 aaPredicted RBP14.47□□□□□ -0.09
POLB-208ENST00000520008 JAG1P78504 1218 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 CCDC158Q5M9N0 1113 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 TTC39AQ5SRH9 613 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 WDR18Q9BV38 432 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 C1orf115Q9H7X2 142 aa14.47□□□□□ -0.09
POLB-208ENST00000520008 BIN2Q9UBW5 565 aaPredicted RBP14.47□□□□□ -0.09
POLB-208ENST00000520008 TRIOBPQ9H2D6 2365 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
POLB-208ENST00000520008 BAG3O95817 575 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 PABPC4Q13310 644 aaKnown RBP eCLIP14.46□□□□□ -0.09
POLB-208ENST00000520008 CRISPLD2Q9H0B8 497 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 ASCC2Q9H1I8 757 aaPredicted RBP14.46□□□□□ -0.09
POLB-208ENST00000520008 PRO3102Q9H379 93 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 AS3MTQ9HBK9 375 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 PIH1D3Q9NQM4 214 aaKnown RBP14.46□□□□□ -0.09
POLB-208ENST00000520008 TLR7Q9NYK1 1049 aaKnown RBP14.46□□□□□ -0.09
POLB-208ENST00000520008 MORF4L1Q9UBU8 362 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 ALPK3Q96L96 1907 aa14.46□□□□□ -0.09
POLB-208ENST00000520008 SURF6O75683 361 aaKnown RBP14.45□□□□□ -0.1
POLB-208ENST00000520008 FARP2O94887 1054 aaPredicted RBP14.45□□□□□ -0.1
POLB-208ENST00000520008 ASNSP08243 561 aa14.45□□□□□ -0.1
POLB-208ENST00000520008 CAPN2P17655 700 aa14.45□□□□□ -0.1
POLB-208ENST00000520008 HOXA7P31268 230 aaPredicted RBP14.45□□□□□ -0.1
POLB-208ENST00000520008 ZAP70P43403 619 aa14.45□□□□□ -0.1
POLB-208ENST00000520008 BACE1P56817 501 aa14.45□□□□□ -0.1
POLB-208ENST00000520008 SHROOM1Q2M3G4 852 aaPredicted RBP14.45□□□□□ -0.1
POLB-208ENST00000520008 MAPKAPK5Q8IW41 473 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms