RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 HERVK_113Q902F9 699 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 NECAB3Q96P71 396 aaPredicted RBP6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 MTIF3Q9H2K0 278 aaKnown RBP6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 PRDM12Q9H4Q4 367 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 PDLIM7Q9NR12 457 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 MSRAQ9UJ68 235 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 COG5Q9UP83 839 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 TTC28Q96AY4 2481 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 UTYO14607 1347 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 MGAMO43451 1857 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 PI4KAP2A4QPH2 592 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 PI4K2BG5E9Z4 385 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 ST18O60284 1047 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 CLTBP09497 229 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 GYG1P46976 350 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 NHLH1Q02575 133 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 GCKRQ14397 625 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 SNX17Q15036 470 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 CWF19L2Q2TBE0 894 aaKnown RBP6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 TRIM60Q495X7 471 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 TREML2Q5T2D2 321 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 PI4KAP1Q8N8J0 262 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 EDC3Q96F86 508 aaKnown RBP6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 FAM84BQ96KN1 310 aaPredicted RBP6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 ASCC2Q9H1I8 757 aaPredicted RBP6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 SLC28A3Q9HAS3 691 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 AS3MTQ9HBK9 375 aa6.24□□□□□ -1.41
AC055854.1-202ENST00000519624 FAM86C2PA6NEL3 165 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 PHF20L1A8MW92 1017 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 GTPBP6O43824 516 aaPredicted RBP6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 ALADP13716 330 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 CCNA1P78396 465 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 ATP2B2Q01814 1243 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 CALD1Q05682 793 aaKnown RBP6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 MAP2K5Q13163 448 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 NEUROD2Q15784 382 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 MICALL1Q8N3F8 863 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 ZNF280CQ8ND82 737 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 UIMC1Q96RL1 719 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 STK31Q9BXU1 1019 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 PBX4Q9BYU1 374 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 TMOD4Q9NZQ9 345 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 MAST2Q6P0Q8 1798 aa6.23□□□□□ -1.41
AC055854.1-202ENST00000519624 TRIM43BA6NCK2 446 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 KIAA0355O15063 1070 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 ENTPD3O75355 529 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 MYCNP04198 464 aaPredicted RBP6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 KCNQ1P51787 676 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 MAP3K10Q02779 954 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 TFF2Q03403 129 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 TLE2Q04725 743 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 SPP2Q13103 211 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 PPIGQ13427 754 aaKnown RBP eCLIP6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 CCL14Q16627 93 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 MORN1Q5T089 497 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 GJC2Q5T442 439 aaPredicted RBP6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 PSRC1Q6PGN9 363 aaPredicted RBP6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 GPR142Q7Z601 462 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 WDR66Q8TBY9 1149 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 USP6NLQ92738 828 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 TRIM43Q96BQ3 446 aaPredicted RBP6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 OSBPL5Q9H0X9 879 aaPredicted RBP6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 TMEM39AQ9NV64 488 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 USP40Q9NVE5 1235 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 IVNS1ABPQ9Y6Y0 642 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 DLG5Q8TDM6 1919 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 MROH5Q6ZUA9 1318 aa6.22□□□□□ -1.41
AC055854.1-202ENST00000519624 XIRP2A4UGR9 3374 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L5A8MUK1 530 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 DCDC2CA8MYV0 355 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 HOXA7P31268 230 aaPredicted RBP6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 HMGCS2P54868 508 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 HERVK_113P62684 666 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 ERVK-9P63128 1117 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 ERVK-24P63145 666 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 NFIAQ12857 509 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 ADGRE1Q14246 886 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 GRIK5Q16478 980 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 SH3D19Q5HYK7 790 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 CDC42EP5Q6NZY7 148 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 SH3RF1Q7Z6J0 888 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 FBXO33Q7Z6M2 555 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 SLC44A5Q8NCS7 719 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 C11orf16Q9NQ32 467 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 MBIPQ9NS73 344 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 FAM198AQ9UFP1 575 aa6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 IQSEC3Q9UPP2 1182 aaPredicted RBP6.21□□□□□ -1.42
AC055854.1-202ENST00000519624 LTBP2Q14767 1821 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 SLC15A5A6NIM6 579 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 ELL2O00472 640 aaPredicted RBP6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 SEPT4O43236 478 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 TBC1D12O60347 775 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 HOXC6P09630 235 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 ADCYAP1R1P41586 468 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 EPHB4P54760 987 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 CASP7P55210 303 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 GNAI1P63096 354 aa6.2□□□□□ -1.42
AC055854.1-202ENST00000519624 DDX10Q13206 875 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms