RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
PVT1-208ENST00000519481 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
PVT1-208ENST00000519481 AGTPBP1Q9UPW5 1226 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 COL2A1P02458 1487 aaPredicted RBP13.31□□□□□ -0.28
PVT1-208ENST00000519481 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
PVT1-208ENST00000519481 PROCA1Q8NCQ7 364 aaPredicted RBP13.31□□□□□ -0.28
PVT1-208ENST00000519481 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
PVT1-208ENST00000519481 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
PVT1-208ENST00000519481 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
PVT1-208ENST00000519481 AS3MTQ9HBK9 375 aa13.31□□□□□ -0.28
PVT1-208ENST00000519481 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
PVT1-208ENST00000519481 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
PVT1-208ENST00000519481 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
PVT1-208ENST00000519481 USP17L5A8MUK1 530 aa13.3□□□□□ -0.28
PVT1-208ENST00000519481 TNPO2O14787 897 aaKnown RBP13.3□□□□□ -0.28
PVT1-208ENST00000519481 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
PVT1-208ENST00000519481 CTGFP29279 349 aa13.3□□□□□ -0.28
PVT1-208ENST00000519481 CAP2P40123 477 aa13.3□□□□□ -0.28
PVT1-208ENST00000519481 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
PVT1-208ENST00000519481 MIER1Q8N108 512 aa13.3□□□□□ -0.28
PVT1-208ENST00000519481 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
PVT1-208ENST00000519481 ZNF280CQ8ND82 737 aa13.3□□□□□ -0.28
PVT1-208ENST00000519481 ZNF512BQ96KM6 892 aaPredicted RBP13.3□□□□□ -0.28
PVT1-208ENST00000519481 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
PVT1-208ENST00000519481 DOCK1Q14185 1865 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
PVT1-208ENST00000519481 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
PVT1-208ENST00000519481 MS4A1P11836 297 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 PPP4CP60510 307 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 PRKCZQ05513 592 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 SPP2Q13103 211 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 CCDC84Q86UT8 332 aaPredicted RBP13.29□□□□□ -0.28
PVT1-208ENST00000519481 ERC1Q8IUD2 1116 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 COA7Q96BR5 231 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
PVT1-208ENST00000519481 CENPFP49454 3210 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 ASNSP08243 561 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 CCL5P13501 91 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 ZAP70P43403 619 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 GCLCP48506 637 aaPredicted RBP13.28□□□□□ -0.28
PVT1-208ENST00000519481 MTFR1Q15390 333 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 CERS3Q8IU89 383 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
PVT1-208ENST00000519481 MAPKAPK5Q8IW41 473 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
PVT1-208ENST00000519481 RNF208Q9H0X6 261 aa13.28□□□□□ -0.28
PVT1-208ENST00000519481 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.28□□□□□ -0.28
PVT1-208ENST00000519481 ADCY3O60266 1144 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
PVT1-208ENST00000519481 GJB1P08034 283 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 RLBP1P12271 317 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 CYP7A1P22680 504 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 FLT3LGP49771 235 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 HMGCS2P54868 508 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 FAM110CQ1W6H9 321 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 ANKRD13CQ8N6S4 541 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 GINM1Q9NU53 330 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 TMOD4Q9NZQ9 345 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 DBNLQ9UJU6 430 aaKnown RBP13.27□□□□□ -0.29
PVT1-208ENST00000519481 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 GABRQQ9UN88 632 aa13.27□□□□□ -0.29
PVT1-208ENST00000519481 CAPN2P17655 700 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 FLT1P17948 1338 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 USP5P45974 858 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 GJA8P48165 433 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 MAP3K12Q12852 859 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 IRF5Q13568 498 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 HABP4Q5JVS0 413 aaKnown RBP13.26□□□□□ -0.29
PVT1-208ENST00000519481 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 CEP85Q6P2H3 762 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 TMED8Q6PL24 325 aaPredicted RBP13.26□□□□□ -0.29
PVT1-208ENST00000519481 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
PVT1-208ENST00000519481 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
PVT1-208ENST00000519481 PXYLP1Q8TE99 480 aa13.25□□□□□ -0.29
PVT1-208ENST00000519481 DPF3Q92784 378 aa13.25□□□□□ -0.29
PVT1-208ENST00000519481 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
PVT1-208ENST00000519481 HTATIP2Q9BUP3 242 aa13.25□□□□□ -0.29
PVT1-208ENST00000519481 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
PVT1-208ENST00000519481 PIH1D3Q9NQM4 214 aaKnown RBP13.25□□□□□ -0.29
PVT1-208ENST00000519481 PALD1Q9ULE6 856 aa13.25□□□□□ -0.29
PVT1-208ENST00000519481 PTPRFP10586 1907 aa13.25□□□□□ -0.29
PVT1-208ENST00000519481 MAST2Q6P0Q8 1798 aa13.25□□□□□ -0.29
PVT1-208ENST00000519481 C19orf81C9J6K1 198 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 INHAP05111 366 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 BACE1P56817 501 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 MTMR2Q13614 643 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
PVT1-208ENST00000519481 ADGRA1Q86SQ6 560 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 AACSQ86V21 672 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 METTL16Q86W50 562 aaKnown RBP13.24□□□□□ -0.29
PVT1-208ENST00000519481 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms