RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 SDSP20132 328 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 INPP5BP32019 993 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 MAP2K2P36507 400 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 PPP4CP60510 307 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 KIF23Q02241 960 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 VGLL4Q14135 290 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 ANKRD13AQ8IZ07 590 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 PIP4P2Q8N4L2 257 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 HOOK2Q96ED9 719 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 WNK4Q96J92 1243 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 ZNF341Q9BYN7 854 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 OSBPL5Q9H0X9 879 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 SAP30BPQ9UHR5 308 aaKnown RBP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 CSADQ9Y600 493 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 COL2A1P02458 1487 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-206ENST00000519115 PITPNM1O00562 1244 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 FOXN1O15353 648 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 REC8O95072 547 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 MBD4O95243 580 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 GSPT1P15170 499 aaKnown RBP9.11□□□□□ -0.95
SDCBP-206ENST00000519115 ADD2P35612 726 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 GJA5P36382 358 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 USP5P45974 858 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 MAP2K1Q02750 393 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-206ENST00000519115 SPRYD7Q5W111 196 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 LCORLQ8N3X6 602 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 KBTBD3Q8NAB2 608 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 RUFY2Q8WXA3 655 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 ZKSCAN4Q969J2 545 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-206ENST00000519115 AIDAQ96BJ3 306 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 RIOK1Q9BRS2 568 aaKnown RBP9.11□□□□□ -0.95
SDCBP-206ENST00000519115 ARMT1Q9H993 441 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
SDCBP-206ENST00000519115 SNCAIPQ9Y6H5 919 aa9.11□□□□□ -0.95
SDCBP-206ENST00000519115 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-206ENST00000519115 OPTNQ96CV9 577 aa9.1□□□□□ -0.95
SDCBP-206ENST00000519115 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
SDCBP-206ENST00000519115 BEGAINQ9BUH8 593 aa9.1□□□□□ -0.95
SDCBP-206ENST00000519115 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
SDCBP-206ENST00000519115 PALD1Q9ULE6 856 aa9.1□□□□□ -0.95
SDCBP-206ENST00000519115 PRKAB2O43741 272 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 RBM25P49756 843 aaKnown RBP9.09□□□□□ -0.95
SDCBP-206ENST00000519115 UBE3CQ15386 1083 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 ZSCAN25Q6NSZ9 544 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 SDR42E1Q8WUS8 393 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 IL17RAQ96F46 866 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 FSD1Q9BTV5 496 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 PUS7LQ9H0K6 701 aaKnown RBP9.09□□□□□ -0.95
SDCBP-206ENST00000519115 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.95
SDCBP-206ENST00000519115 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.09□□□□□ -0.95
SDCBP-206ENST00000519115 ZNF112Q9UJU3 913 aa9.09□□□□□ -0.95
SDCBP-206ENST00000519115 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 UNCXA6NJT0 531 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 PHF20L1A8MW92 1017 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 RNF113AO15541 343 aaKnown RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 ZFYP08048 801 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 ZBTB48P10074 688 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 HSPA8P11142 646 aaKnown RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 CHMLP26374 656 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 EVX2Q03828 476 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 ERO1BQ86YB8 467 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 CRACR2BQ8N4Y2 399 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 OSBP2Q969R2 916 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 DHX36Q9H2U1 1008 aaKnown RBP9.08□□□□□ -0.96
SDCBP-206ENST00000519115 DNAJC18Q9H819 358 aa9.08□□□□□ -0.96
SDCBP-206ENST00000519115 RAD50Q92878 1312 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 MANSC4A6NHS7 340 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 M0R2C6 588 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 TRPA1O75762 1119 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 HLA-DOAP06340 250 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 CYP2D6P10635 497 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 CTCFP49711 727 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 LBX1P52954 281 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 ANAPC15P60006 121 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 SREBF2Q12772 1141 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 RRP1BQ14684 758 aaKnown RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 SHROOM1Q2M3G4 852 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 NOL9Q5SY16 702 aaKnown RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 SKAP1Q86WV1 359 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 APPBP2Q92624 585 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 SEC62Q99442 399 aaKnown RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 TRIM34Q9BYJ4 488 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 DCP1AQ9NPI6 582 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 RNF186Q9NXI6 227 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms