RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
VEGFA-219ENST00000518824 SALL3Q9BXA9 1300 aa16.15■□□□□ 0.18
VEGFA-219ENST00000518824 MAGEB6P1A0A0J9YX57 407 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 GPR25O00155 361 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 TBC1D12O60347 775 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 IGSF3O75054 1194 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 INHBEP58166 350 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 CAP1Q01518 475 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 PPATQ06203 517 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 MOGSQ13724 837 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 SCYL3Q8IZE3 742 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 PI4K2BQ8TCG2 481 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
VEGFA-219ENST00000518824 BTBD19C9JJ37 291 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 SMIM22K7EJ46 135 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 PRKAB2O43741 272 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 CAPN15O75808 1086 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 PTPRAP18433 802 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 USP5P45974 858 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 GTF2A2P52657 109 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 CRHR2Q13324 411 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 SDR42E1Q8WUS8 393 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 CFHR5Q9BXR6 569 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 ZHX2Q9Y6X8 837 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 NAV1Q8NEY1 1877 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 PTPRFP10586 1907 aa16.13■□□□□ 0.17
VEGFA-219ENST00000518824 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
VEGFA-219ENST00000518824 MCOLN1Q9GZU1 580 aa16.12■□□□□ 0.17
VEGFA-219ENST00000518824 PUS7LQ9H0K6 701 aaKnown RBP16.12■□□□□ 0.17
VEGFA-219ENST00000518824 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
VEGFA-219ENST00000518824 KCNH4Q9UQ05 1017 aa16.12■□□□□ 0.17
VEGFA-219ENST00000518824 MBD4O95243 580 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 CYP2D6P10635 497 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 CAP2P40123 477 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 PLCD1P51178 756 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 SNAPC2Q13487 334 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 DGKZQ13574 1117 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
VEGFA-219ENST00000518824 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
VEGFA-219ENST00000518824 AFG3L2Q9Y4W6 797 aa16.11■□□□□ 0.17
VEGFA-219ENST00000518824 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
VEGFA-219ENST00000518824 ZSWIM8A7E2V4 1837 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 GDF11O95390 407 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 ALDH1A1P00352 501 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 CETPP11597 493 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 SMC5Q8IY18 1101 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 PICK1Q9NRD5 415 aa16.1■□□□□ 0.17
VEGFA-219ENST00000518824 MX1P20591 662 aa16.09■□□□□ 0.17
VEGFA-219ENST00000518824 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
VEGFA-219ENST00000518824 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-219ENST00000518824 OSBP2Q969R2 916 aa16.09■□□□□ 0.17
VEGFA-219ENST00000518824 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
VEGFA-219ENST00000518824 DCP1AQ9NPI6 582 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-219ENST00000518824 HERC5Q9UII4 1024 aaKnown RBP16.09■□□□□ 0.17
VEGFA-219ENST00000518824 TTC41PQ6P2S7 1318 aa16.09■□□□□ 0.17
VEGFA-219ENST00000518824 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
VEGFA-219ENST00000518824 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
VEGFA-219ENST00000518824 FKTNO75072 461 aa16.08■□□□□ 0.16
VEGFA-219ENST00000518824 TMED8Q6PL24 325 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-219ENST00000518824 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-219ENST00000518824 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-219ENST00000518824 ABHD8Q96I13 439 aa16.08■□□□□ 0.16
VEGFA-219ENST00000518824 CRNKL1Q9BZJ0 848 aaKnown RBP16.08■□□□□ 0.16
VEGFA-219ENST00000518824 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.08■□□□□ 0.165e-41■□□□□ 9.6
VEGFA-219ENST00000518824 A0A0G2JLL6 359 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-219ENST00000518824 M0R2C6 588 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 CXCL11O14625 94 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 HLA-DOAP06340 250 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 PDE1AP54750 535 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 AAMPQ13685 434 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
VEGFA-219ENST00000518824 OTUD7BQ6GQQ9 843 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 PRRT2Q7Z6L0 340 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-219ENST00000518824 CERS3Q8IU89 383 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 SLC44A5Q8NCS7 719 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 SEC62Q99442 399 aaKnown RBP16.07■□□□□ 0.16
VEGFA-219ENST00000518824 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-219ENST00000518824 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
VEGFA-219ENST00000518824 PDHXO00330 501 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
VEGFA-219ENST00000518824 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-219ENST00000518824 SHMT1P34896 483 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 GABPAQ06546 454 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 SPP2Q13103 211 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 CTU1Q7Z7A3 348 aaKnown RBP16.06■□□□□ 0.16
VEGFA-219ENST00000518824 ANKRD23Q86SG2 305 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 CD99L2Q8TCZ2 262 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 STAP2Q9UGK3 403 aa16.06■□□□□ 0.16
VEGFA-219ENST00000518824 ADGRA2Q96PE1 1338 aa16.05■□□□□ 0.16
VEGFA-219ENST00000518824 RNF113AO15541 343 aaKnown RBP16.05■□□□□ 0.16
VEGFA-219ENST00000518824 POLR3DP05423 398 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-219ENST00000518824 CYP2C8P10632 490 aa16.05■□□□□ 0.16
VEGFA-219ENST00000518824 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms