RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 KRT32Q14532 448 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 USP48Q86UV5 1035 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 ZFPM1Q8IX07 1006 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 KCNB2Q92953 911 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 TRIM34Q9BYJ4 488 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 TMEM39BQ9GZU3 492 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 ROBO3Q96MS0 1386 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 MYH7P12883 1935 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 MINDY4BA8MYZ0 360 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
CLN8-203ENST00000518780 PLCD1P51178 756 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 ANAPC15P60006 121 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 GABPAQ06546 454 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 TATDN1Q6P1N9 297 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 CRACR2BQ8N4Y2 399 aaPredicted RBP11.25□□□□□ -0.61
CLN8-203ENST00000518780 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
CLN8-203ENST00000518780 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
CLN8-203ENST00000518780 MYO5AQ9Y4I1 1855 aaKnown RBP11.24□□□□□ -0.61
CLN8-203ENST00000518780 ORC4O43929 436 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
CLN8-203ENST00000518780 CYP21A2P08686 494 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 TRDNQ13061 729 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 NBPF12Q5TAG4 269 aaPredicted RBP11.24□□□□□ -0.61
CLN8-203ENST00000518780 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
CLN8-203ENST00000518780 CREB3L3Q68CJ9 461 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 STAG1Q8WVM7 1258 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 CDCA5Q96FF9 252 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 GLIS2Q9BZE0 524 aaPredicted RBP11.24□□□□□ -0.61
CLN8-203ENST00000518780 KRT23Q9C075 422 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLN8-203ENST00000518780 AK9Q5TCS8 1911 aa11.24□□□□□ -0.61
CLN8-203ENST00000518780 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 SLC27A2O14975 620 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
CLN8-203ENST00000518780 PSMA5P28066 241 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 CDK8P49336 464 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 IL17RAQ96F46 866 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 ZNF112Q9UJU3 913 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 ADAMTSL1Q8N6G6 1762 aa11.23□□□□□ -0.61
CLN8-203ENST00000518780 CTNND1O60716 968 aaKnown RBP11.22□□□□□ -0.61
CLN8-203ENST00000518780 SEC24BO95487 1268 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 CYP2D6P10635 497 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
CLN8-203ENST00000518780 RBM25P49756 843 aaKnown RBP11.22□□□□□ -0.61
CLN8-203ENST00000518780 CCDC178Q5BJE1 867 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 ZNF444Q8N0Y2 327 aaPredicted RBP11.22□□□□□ -0.61
CLN8-203ENST00000518780 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 ESR2Q92731 530 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 TM6SF1Q9BZW5 370 aa11.22□□□□□ -0.61
CLN8-203ENST00000518780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLN8-203ENST00000518780 PASKQ96RG2 1323 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 E7EWF7 191 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 HAND2P61296 217 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 CERKLQ49MI3 558 aaPredicted RBP11.21□□□□□ -0.61
CLN8-203ENST00000518780 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.61
CLN8-203ENST00000518780 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 KLRG1Q96E93 195 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 CABP5Q9NP86 173 aa11.21□□□□□ -0.61
CLN8-203ENST00000518780 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 PHF20L1A8MW92 1017 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 USP2O75604 605 aaPredicted RBP11.2□□□□□ -0.62
CLN8-203ENST00000518780 ASNSP08243 561 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 SHMT1P34896 483 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 CAP2P40123 477 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 NOL9Q5SY16 702 aaKnown RBP11.2□□□□□ -0.62
CLN8-203ENST00000518780 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 MIGA2Q7L4E1 593 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 TCP11L1Q9NUJ3 509 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 SCAF8Q9UPN6 1271 aaKnown RBP11.2□□□□□ -0.62
CLN8-203ENST00000518780 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
CLN8-203ENST00000518780 ECM29Q5VYK3 1845 aa11.19□□□□□ -0.62
CLN8-203ENST00000518780 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
CLN8-203ENST00000518780 TRAF5O00463 557 aa11.19□□□□□ -0.62
CLN8-203ENST00000518780 CELF2O95319 508 aaKnown RBP11.19□□□□□ -0.62
CLN8-203ENST00000518780 RASA1P20936 1047 aa11.19□□□□□ -0.62
CLN8-203ENST00000518780 MCM5P33992 734 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms