RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 DGKZQ13574 1117 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 PRRT2Q7Z6L0 340 aaPredicted RBP13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 ANKRD23Q86SG2 305 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 FOXP4Q8IVH2 680 aaPredicted RBP13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 TGFBRAP1Q8WUH2 860 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 ECHDC1Q9NTX5 307 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 PAG1Q9NWQ8 432 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 CAP2P40123 477 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 GPAT2Q6NUI2 795 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 MAPKAPK5Q8IW41 473 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 MIGA1Q8NAN2 632 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 EHD4Q9H223 541 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 BOLA2Q9H3K6 86 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 GINM1Q9NU53 330 aa13.75□□□□□ -0.21
IGHV3-25-201ENST00000518224 ZNF532Q9HCE3 1301 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 TLR2O60603 784 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 ADD2P35612 726 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 UBE3CQ15386 1083 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 DNAJC2Q99543 621 aaKnown RBP13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 ZFYVE28Q9HCC9 887 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 PICK1Q9NRD5 415 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 PALD1Q9ULE6 856 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 SLC45A1Q9Y2W3 748 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 MYH1P12882 1939 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 MYH7P12883 1935 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 BRCA2P51587 3418 aa13.74□□□□□ -0.21
IGHV3-25-201ENST00000518224 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
IGHV3-25-201ENST00000518224 FAM196BA6NMK8 535 aa13.73□□□□□ -0.21
IGHV3-25-201ENST00000518224 CAP1Q01518 475 aa13.73□□□□□ -0.21
IGHV3-25-201ENST00000518224 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
IGHV3-25-201ENST00000518224 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
IGHV3-25-201ENST00000518224 ATAD5Q96QE3 1844 aa13.73□□□□□ -0.21
IGHV3-25-201ENST00000518224 TTC41PQ6P2S7 1318 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 JAG1P78504 1218 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 SP3Q02447 781 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 GABPAQ06546 454 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 FBXO46Q6PJ61 603 aaPredicted RBP13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 C17orf99Q6UX52 265 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 WDR18Q9BV38 432 aa13.72□□□□□ -0.21
IGHV3-25-201ENST00000518224 LOC285556D6RIA3 1793 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 MKI67P46013 3256 aaKnown RBP13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 PDHXO00330 501 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 ASNSP08243 561 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 RGS19P49795 217 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 OTOP1Q7RTM1 612 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 PI4K2BQ8TCG2 481 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 DCP1AQ9NPI6 582 aaPredicted RBP13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 SERPINB13Q9UIV8 391 aa13.71□□□□□ -0.21
IGHV3-25-201ENST00000518224 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 HLA-DOAP06340 250 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 USP5P45974 858 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 TTC6Q86TZ1 520 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 PROCA1Q8NCQ7 364 aaPredicted RBP13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 ZNF280CQ8ND82 737 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 GPATCH3Q96I76 525 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 SAP30BPQ9UHR5 308 aaKnown RBP13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 NAV1Q8NEY1 1877 aa13.7□□□□□ -0.22
IGHV3-25-201ENST00000518224 CHGBP05060 677 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 BCRP11274 1271 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 PLCD1P51178 756 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 ZSCAN25Q6NSZ9 544 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 CCDC84Q86UT8 332 aaPredicted RBP13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 OTUD7AQ8TE49 926 aaPredicted RBP13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 ATP8A2Q9NTI2 1148 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 STAP2Q9UGK3 403 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 HPS5Q9UPZ3 1129 aa13.69□□□□□ -0.22
IGHV3-25-201ENST00000518224 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 MBD4O95243 580 aa13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 SHMT1P34896 483 aa13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 LACTBP83111 547 aaPredicted RBP13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 SPP2Q13103 211 aa13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 PARK7Q99497 189 aaKnown RBP13.68□□□□□ -0.22
IGHV3-25-201ENST00000518224 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms