RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 EFCC1Q9HA90 598 aa10.7□□□□□ -0.7
PABPC1-202ENST00000517403 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
PABPC1-202ENST00000517403 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
PABPC1-202ENST00000517403 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
PABPC1-202ENST00000517403 DAXXQ9UER7 740 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-202ENST00000517403 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
PABPC1-202ENST00000517403 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
PABPC1-202ENST00000517403 KIAA0100Q14667 2235 aaKnown RBP10.69□□□□□ -0.7
PABPC1-202ENST00000517403 A0A0G2JLL6 359 aaPredicted RBP10.69□□□□□ -0.7
PABPC1-202ENST00000517403 PDHXO00330 501 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 ENTPD3O75355 529 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 CHGBP05060 677 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 BCRP11274 1271 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 CETPP11597 493 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 ZAP70P43403 619 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 PPATQ06203 517 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 SNAPC2Q13487 334 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 MTFR1Q15390 333 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 TREML2Q5T2D2 321 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 CEP85Q6P2H3 762 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 PRRT2Q7Z6L0 340 aaPredicted RBP10.69□□□□□ -0.7
PABPC1-202ENST00000517403 ANKRD23Q86SG2 305 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 SIRT2Q8IXJ6 389 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 SCYL3Q8IZE3 742 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
PABPC1-202ENST00000517403 NEUROD6Q96NK8 337 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 ANTXR1Q9H6X2 564 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 GABRQQ9UN88 632 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 AFG3L2Q9Y4W6 797 aa10.69□□□□□ -0.7
PABPC1-202ENST00000517403 MYH1P12882 1939 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 OSBPP22059 807 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
PABPC1-202ENST00000517403 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 MVPQ14764 893 aaKnown RBP10.68□□□□□ -0.7
PABPC1-202ENST00000517403 SLC4A8Q2Y0W8 1093 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 SLFNL1Q499Z3 407 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 OSBPL5Q9H0X9 879 aaPredicted RBP10.68□□□□□ -0.7
PABPC1-202ENST00000517403 ZFYVE28Q9HCC9 887 aa10.68□□□□□ -0.7
PABPC1-202ENST00000517403 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
PABPC1-202ENST00000517403 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
PABPC1-202ENST00000517403 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
PABPC1-202ENST00000517403 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
PABPC1-202ENST00000517403 ITPRIPQ8IWB1 547 aa10.67□□□□□ -0.7
PABPC1-202ENST00000517403 CCDC8Q9H0W5 538 aaPredicted RBP10.67□□□□□ -0.7
PABPC1-202ENST00000517403 GNL3LQ9NVN8 582 aaKnown RBP10.67□□□□□ -0.7
PABPC1-202ENST00000517403 EXOC6BQ9Y2D4 811 aa10.67□□□□□ -0.7
PABPC1-202ENST00000517403 NOP58Q9Y2X3 529 aaKnown RBP10.67□□□□□ -0.7
PABPC1-202ENST00000517403 ZHX2Q9Y6X8 837 aa10.67□□□□□ -0.7
PABPC1-202ENST00000517403 FLT1P17948 1338 aa10.66□□□□□ -0.7
PABPC1-202ENST00000517403 PRKCZQ05513 592 aa10.66□□□□□ -0.7
PABPC1-202ENST00000517403 HOMEZQ8IX15 550 aa10.66□□□□□ -0.7
PABPC1-202ENST00000517403 EDC3Q96F86 508 aaKnown RBP10.66□□□□□ -0.7
PABPC1-202ENST00000517403 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
PABPC1-202ENST00000517403 AATFQ9NY61 560 aaKnown RBP eCLIP10.66□□□□□ -0.7
PABPC1-202ENST00000517403 RLFQ13129 1914 aa10.65□□□□□ -0.7
PABPC1-202ENST00000517403 TRIM75PA6NK02 468 aa10.65□□□□□ -0.7
PABPC1-202ENST00000517403 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
PABPC1-202ENST00000517403 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
PABPC1-202ENST00000517403 MAPKAPK5Q8IW41 473 aa10.65□□□□□ -0.7
PABPC1-202ENST00000517403 ZSCAN29Q8IWY8 852 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-202ENST00000517403 ZCCHC17Q9NP64 241 aaKnown RBP10.65□□□□□ -0.7
PABPC1-202ENST00000517403 GPR108Q9NPR9 543 aa10.65□□□□□ -0.7
PABPC1-202ENST00000517403 RAI14Q9P0K7 980 aa10.65□□□□□ -0.7
PABPC1-202ENST00000517403 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.7
PABPC1-202ENST00000517403 PARP14Q460N5 1801 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 FRMPD3Q5JV73 1810 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 IPO8O15397 1037 aaKnown RBP10.64□□□□□ -0.71
PABPC1-202ENST00000517403 PSMC4P43686 418 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 G3BP1Q13283 466 aaKnown RBP eCLIP10.64□□□□□ -0.712e-12■■□□□ 11.7
PABPC1-202ENST00000517403 OTUD7BQ6GQQ9 843 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
PABPC1-202ENST00000517403 UBE2Q1Q7Z7E8 422 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 SRRDQ9UH36 339 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 SAP30BPQ9UHR5 308 aaKnown RBP10.64□□□□□ -0.71
PABPC1-202ENST00000517403 PALD1Q9ULE6 856 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 A0A0G2JMZ2 1700 aa10.64□□□□□ -0.71
PABPC1-202ENST00000517403 BAZ2AQ9UIF9 1905 aaKnown RBP10.63□□□□□ -0.71
PABPC1-202ENST00000517403 CXCL11O14625 94 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 GDF11O95390 407 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 ELNP15502 786 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 TRIM32Q13049 653 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 SLC9C1Q4G0N8 1177 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 ZGPATQ8N5A5 531 aaKnown RBP10.63□□□□□ -0.71
PABPC1-202ENST00000517403 MIGA1Q8NAN2 632 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 TGFBRAP1Q8WUH2 860 aa10.63□□□□□ -0.71
PABPC1-202ENST00000517403 MYH7P12883 1935 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 MYPNQ86TC9 1320 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 TBC1D12O60347 775 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 CTNND1O60716 968 aaKnown RBP10.62□□□□□ -0.71
PABPC1-202ENST00000517403 CAP2P40123 477 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 HMGCS2P54868 508 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 SPP2Q13103 211 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 TTC39AQ5SRH9 613 aa10.62□□□□□ -0.71
PABPC1-202ENST00000517403 NAA16Q6N069 864 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms