RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TPTE2Q6XPS3 522 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 SPOCD1Q6ZMY3 1216 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 ZSCAN29Q8IWY8 852 aaPredicted RBP5.95□□□□□ -1.46
HERC4-215ENST00000515753 SPACA3Q8IXA5 215 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 SLC38A3Q99624 504 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 EMILIN2Q9BXX0 1053 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 PRDM10Q9NQV6 1147 aa5.95□□□□□ -1.46
HERC4-215ENST00000515753 PNMA6FA0A0J9YX94 578 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 ZNF503-AS2A6NEH8 195 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 FBXO24O75426 580 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 PAGE1O75459 146 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 MESP2Q0VG99 397 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 ENOX2Q16206 610 aaKnown RBP5.94□□□□□ -1.46
HERC4-215ENST00000515753 KCNMB1Q16558 191 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 NKPD1Q17RQ9 610 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 FYB2Q5VWT5 728 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 AEBP1Q8IUX7 1158 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 FLAD1Q8NFF5 587 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 ASB11Q8WXH4 323 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 LIN37Q96GY3 246 aaPredicted RBP5.94□□□□□ -1.46
HERC4-215ENST00000515753 GTF2IRD1Q9UHL9 959 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 SNX11Q9Y5W9 270 aa5.94□□□□□ -1.46
HERC4-215ENST00000515753 RBAK-RBAKDNI3L0D1 243 aa5.93□□□□□ -1.46
HERC4-215ENST00000515753 BMP6P22004 513 aa5.93□□□□□ -1.46
HERC4-215ENST00000515753 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
HERC4-215ENST00000515753 C3orf58Q8NDZ4 430 aa5.93□□□□□ -1.46
HERC4-215ENST00000515753 FBF1Q8TES7 1133 aa5.93□□□□□ -1.46
HERC4-215ENST00000515753 NECAB3Q96P71 396 aaPredicted RBP5.93□□□□□ -1.46
HERC4-215ENST00000515753 IGF2BP3O00425 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
HERC4-215ENST00000515753 ENC1O14682 589 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 EOMESO95936 686 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 RASIP1Q5U651 963 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 HOMEZQ8IX15 550 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 FAM84AQ96KN4 292 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 CACNA2D2Q9NY47 1150 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 PCDHA4Q9UN74 947 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 CTNND2Q9UQB3 1225 aa5.92□□□□□ -1.46
HERC4-215ENST00000515753 GNAT3A8MTJ3 354 aa5.91□□□□□ -1.46
HERC4-215ENST00000515753 PLCB3Q01970 1234 aa5.91□□□□□ -1.46
HERC4-215ENST00000515753 ZBTB37Q5TC79 503 aa5.91□□□□□ -1.46
HERC4-215ENST00000515753 CDC37L1Q7L3B6 337 aa5.91□□□□□ -1.46
HERC4-215ENST00000515753 CNTNAP4Q9C0A0 1308 aa5.91□□□□□ -1.46
HERC4-215ENST00000515753 PRR33A8MZF0 331 aa5.9□□□□□ -1.46
HERC4-215ENST00000515753 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
HERC4-215ENST00000515753 RING1Q06587 406 aa5.9□□□□□ -1.46
HERC4-215ENST00000515753 DNAJC14Q6Y2X3 702 aaPredicted RBP5.9□□□□□ -1.46
HERC4-215ENST00000515753 ARMCX6Q7L4S7 300 aa5.9□□□□□ -1.46
HERC4-215ENST00000515753 SETDB2Q96T68 719 aa5.9□□□□□ -1.46
HERC4-215ENST00000515753 CARS2Q9HA77 564 aaKnown RBP5.9□□□□□ -1.46
HERC4-215ENST00000515753 PRDM5Q9NQX1 630 aaPredicted RBP5.9□□□□□ -1.46
HERC4-215ENST00000515753 PITPNM2Q9BZ72 1349 aa5.9□□□□□ -1.47
HERC4-215ENST00000515753 PRAMEF27A3QJZ7 478 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 FANCGO15287 622 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 TRIM37O94972 964 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 INPP5AQ14642 412 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 LLGL2Q6P1M3 1020 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 PRR23BQ6ZRT6 265 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 ELMO3Q96BJ8 720 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 HSPA12BQ96MM6 686 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 OSBPL7Q9BZF2 842 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 ATP13A1Q9HD20 1204 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 FAM53CQ9NYF3 392 aa5.89□□□□□ -1.47
HERC4-215ENST00000515753 SLITRK5O94991 958 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 ERCC3P19447 782 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 GSTT1P30711 240 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 AFMP43652 599 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 MAPK8P45983 427 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 RAP1GAPP47736 663 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 CLCN7P51798 805 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 PTPN11Q06124 597 aaPredicted RBP5.88□□□□□ -1.47
HERC4-215ENST00000515753 ALG1LQ6GMV1 187 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 MPZL3Q6UWV2 235 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 FOXQ1Q9C009 403 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 SRCIN1Q9C0H9 1055 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 FBRSQ9HAH7 460 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 TPX2Q9ULW0 747 aaKnown RBP5.88□□□□□ -1.47
HERC4-215ENST00000515753 SAMM50Q9Y512 469 aa5.88□□□□□ -1.47
HERC4-215ENST00000515753 FAM155AB1AL88 458 aaPredicted RBP5.87□□□□□ -1.47
HERC4-215ENST00000515753 H3BS24 57 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 P4HBP07237 508 aaKnown RBP5.87□□□□□ -1.47
HERC4-215ENST00000515753 CELA3AP09093 270 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 CFPP27918 469 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 FGD1P98174 961 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 LRFN4Q6PJG9 635 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 SYDE1Q6ZW31 735 aaPredicted RBP5.87□□□□□ -1.47
HERC4-215ENST00000515753 CYFIP1Q7L576 1253 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 CILP2Q8IUL8 1156 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 NPAS4Q8IUM7 802 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 RIN3Q8TB24 985 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 ANKRD24Q8TF21 1146 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 KIRREL1Q96J84 757 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 MIPEPQ99797 713 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 KRTAP4-5Q9BYR2 181 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 CEP44Q9C0F1 390 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 SEMA3GQ9NS98 782 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 C19orf73Q9NVV2 129 aa5.87□□□□□ -1.47
HERC4-215ENST00000515753 GIPC1O14908 333 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms