RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CPLX2Q6PUV4 134 aaKnown RBP23.55■■□□□ 1.36
TRIO-223ENST00000515710 MAPKAPK5Q8IW41 473 aa23.55■■□□□ 1.36
TRIO-223ENST00000515710 ZSCAN10Q96SZ4 725 aaPredicted RBP23.55■■□□□ 1.36
TRIO-223ENST00000515710 ZKSCAN3Q9BRR0 538 aa23.55■■□□□ 1.36
TRIO-223ENST00000515710 PIM2Q9P1W9 311 aa23.55■■□□□ 1.36
TRIO-223ENST00000515710 PPIP5K2O43314 1243 aa23.54■■□□□ 1.36
TRIO-223ENST00000515710 POLR3DP05423 398 aaPredicted RBP23.54■■□□□ 1.36
TRIO-223ENST00000515710 SEC23AQ15436 765 aa23.54■■□□□ 1.36
TRIO-223ENST00000515710 TEKT1Q969V4 418 aa23.54■■□□□ 1.36
TRIO-223ENST00000515710 MXD3Q9BW11 206 aa23.54■■□□□ 1.36
TRIO-223ENST00000515710 LMBRD1Q9NUN5 540 aa23.54■■□□□ 1.36
TRIO-223ENST00000515710 NID2Q14112 1375 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 CDKL5O76039 1030 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 HDLBPQ00341 1268 aaKnown RBP23.53■■□□□ 1.36
TRIO-223ENST00000515710 R3HDM1Q15032 1099 aaKnown RBP23.53■■□□□ 1.36
TRIO-223ENST00000515710 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.36
TRIO-223ENST00000515710 KCNQ5Q9NR82 932 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 TNKSO95271 1327 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 GOLGA8AA7E2F4 631 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 H3BQV1 296 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 PRDM1O75626 825 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 IFFO2Q5TF58 517 aa23.53■■□□□ 1.36
TRIO-223ENST00000515710 CDC37L1Q7L3B6 337 aa23.52■■□□□ 1.36
TRIO-223ENST00000515710 ZNF287Q9HBT7 754 aa23.52■■□□□ 1.36
TRIO-223ENST00000515710 FLT1P17948 1338 aa23.52■■□□□ 1.36
TRIO-223ENST00000515710 EVX2Q03828 476 aa23.51■■□□□ 1.35
TRIO-223ENST00000515710 MICU3Q86XE3 530 aa23.51■■□□□ 1.35
TRIO-223ENST00000515710 RAB11FIP4Q86YS3 637 aa23.51■■□□□ 1.35
TRIO-223ENST00000515710 RGS22Q8NE09 1264 aa23.51■■□□□ 1.35
TRIO-223ENST00000515710 NAV1Q8NEY1 1877 aa23.51■■□□□ 1.35
TRIO-223ENST00000515710 PRPF40AO75400 957 aaKnown RBP23.51■■□□□ 1.35
TRIO-223ENST00000515710 FDPSP14324 419 aaKnown RBP23.51■■□□□ 1.35
TRIO-223ENST00000515710 PPP2R5BQ15173 497 aa23.51■■□□□ 1.35
TRIO-223ENST00000515710 ADD1P35611 737 aaKnown RBP23.5■■□□□ 1.35
TRIO-223ENST00000515710 CRKP46108 304 aa23.5■■□□□ 1.35
TRIO-223ENST00000515710 SCNN1DP51172 638 aa23.5■■□□□ 1.35
TRIO-223ENST00000515710 ORC3Q9UBD5 711 aaPredicted RBP23.5■■□□□ 1.35
TRIO-223ENST00000515710 SAP30BPQ9UHR5 308 aaKnown RBP23.5■■□□□ 1.35
TRIO-223ENST00000515710 CDC27P30260 824 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 CCDC178Q5BJE1 867 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 IFIT1BQ5T764 474 aaKnown RBP23.49■■□□□ 1.35
TRIO-223ENST00000515710 ZNF654Q8IZM8 581 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 ENAHQ8N8S7 591 aaPredicted RBP23.49■■□□□ 1.35
TRIO-223ENST00000515710 CHAMP1Q96JM3 812 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 ZDHHC15Q96MV8 337 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 ZSCAN16Q9H4T2 348 aaPredicted RBP23.49■■□□□ 1.35
TRIO-223ENST00000515710 MKNK2Q9HBH9 465 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 USP40Q9NVE5 1235 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 CCDC196A0A1B0GTZ2 297 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 TSPY2A6NKD2 308 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 PLCD1P51178 756 aa23.49■■□□□ 1.35
TRIO-223ENST00000515710 FAM217BQ9NTX9 383 aaPredicted RBP23.49■■□□□ 1.35
TRIO-223ENST00000515710 DALRD3Q5D0E6 543 aaKnown RBP23.48■■□□□ 1.35
TRIO-223ENST00000515710 APOBEC3HQ6NTF7 200 aaKnown RBP23.48■■□□□ 1.35
TRIO-223ENST00000515710 CD2APQ9Y5K6 639 aa23.48■■□□□ 1.35
TRIO-223ENST00000515710 RXRAP19793 462 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 NTRK3Q16288 839 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 RTN1Q16799 776 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CSPP1Q1MSJ5 1256 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 KLHL40Q2TBA0 621 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
TRIO-223ENST00000515710 FAM47AQ5JRC9 791 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
TRIO-223ENST00000515710 C16orf86Q6ZW13 317 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 KIAA0825Q8IV33 1275 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 ZNF444Q8N0Y2 327 aaPredicted RBP23.47■■□□□ 1.35
TRIO-223ENST00000515710 TMEM87AQ8NBN3 555 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 DYNLL2Q96FJ2 89 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 SGIP1Q9BQI5 828 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 MYL10Q9BUA6 226 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 DDX49Q9Y6V7 483 aaKnown RBP23.47■■□□□ 1.35
TRIO-223ENST00000515710 YDJCA8MPS7 323 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CALM1P0DP23 149 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CALM2P0DP24 149 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CALM3P0DP25 149 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 GSE1Q14687 1217 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CDC42EP5Q6NZY7 148 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CATIPQ7Z7H3 387 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 TTC6Q86TZ1 520 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 LARGE2Q8N3Y3 721 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 SERPINA10Q9UK55 444 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 CDK5RAP2Q96SN8 1893 aa23.47■■□□□ 1.35
TRIO-223ENST00000515710 MYO3BQ8WXR4 1341 aa23.46■■□□□ 1.35
TRIO-223ENST00000515710 WDHD1O75717 1129 aaPredicted RBP23.46■■□□□ 1.35
TRIO-223ENST00000515710 TFAP4Q01664 338 aa23.46■■□□□ 1.35
TRIO-223ENST00000515710 SLC4A8Q2Y0W8 1093 aa23.46■■□□□ 1.35
TRIO-223ENST00000515710 CCDC144CPQ8IYA2 1237 aa23.46■■□□□ 1.35
TRIO-223ENST00000515710 FANCBQ8NB91 859 aa23.46■■□□□ 1.35
TRIO-223ENST00000515710 TCP11L1Q9NUJ3 509 aa23.46■■□□□ 1.35
TRIO-223ENST00000515710 DDX60LQ5H9U9 1706 aaKnown RBP23.46■■□□□ 1.35
TRIO-223ENST00000515710 STK36Q9NRP7 1315 aa23.45■■□□□ 1.35
TRIO-223ENST00000515710 IFNAR1P17181 557 aa23.45■■□□□ 1.35
TRIO-223ENST00000515710 IARSP41252 1262 aaKnown RBP23.45■■□□□ 1.35
TRIO-223ENST00000515710 RESTQ13127 1097 aa23.45■■□□□ 1.35
TRIO-223ENST00000515710 FERMT3Q86UX7 667 aa23.45■■□□□ 1.35
TRIO-223ENST00000515710 ZNF646O15015 1829 aaPredicted RBP23.45■■□□□ 1.34
TRIO-223ENST00000515710 SCN9AQ15858 1988 aa23.45■■□□□ 1.34
TRIO-223ENST00000515710 ZNF277Q9NRM2 450 aaPredicted RBP23.45■■□□□ 1.34
TRIO-223ENST00000515710 CNPY2Q9Y2B0 182 aa23.45■■□□□ 1.34
TRIO-223ENST00000515710 FOCADQ5VW36 1801 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms