RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 HERC5Q9UII4 1024 aaKnown RBP24.95■■□□□ 1.58
LSM6-207ENST00000515311 SERPINB13Q9UIV8 391 aa24.95■■□□□ 1.58
LSM6-207ENST00000515311 SSC5DA1L4H1 1573 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 TBC1D12O60347 775 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 HSPA4P34932 840 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 MAP3K10Q02779 954 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 GABPAQ06546 454 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 NBPF12Q5TAG4 269 aaPredicted RBP24.94■■□□□ 1.58
LSM6-207ENST00000515311 CREB3L3Q68CJ9 461 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 CDCA5Q96FF9 252 aa24.94■■□□□ 1.58
LSM6-207ENST00000515311 SLC27A2O14975 620 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 TOMM70O94826 608 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 CYP21A2P08686 494 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 PCP11498 1178 aaKnown RBP24.93■■□□□ 1.58
LSM6-207ENST00000515311 MCCP23508 829 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 HAND2P61296 217 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 EVX2Q03828 476 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 RBM46Q8TBY0 533 aaKnown RBP24.93■■□□□ 1.58
LSM6-207ENST00000515311 NBPF3Q9H094 633 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 UPF2Q9HAU5 1272 aaKnown RBP24.93■■□□□ 1.58
LSM6-207ENST00000515311 SWAP70Q9UH65 585 aa24.93■■□□□ 1.58
LSM6-207ENST00000515311 TRPM7Q96QT4 1865 aa24.92■■□□□ 1.58
LSM6-207ENST00000515311 PRAMEF18Q5VWM3 479 aa24.92■■□□□ 1.58
LSM6-207ENST00000515311 DCAF15Q66K64 600 aa24.92■■□□□ 1.58
LSM6-207ENST00000515311 C16orf86Q6ZW13 317 aa24.92■■□□□ 1.58
LSM6-207ENST00000515311 CRACR2BQ8N4Y2 399 aaPredicted RBP24.92■■□□□ 1.58
LSM6-207ENST00000515311 SMC1BQ8NDV3 1235 aa24.92■■□□□ 1.58
LSM6-207ENST00000515311 KCNB2Q92953 911 aa24.92■■□□□ 1.58
LSM6-207ENST00000515311 SMIM22K7EJ46 135 aa24.91■■□□□ 1.58
LSM6-207ENST00000515311 ITGBL1O95965 494 aaPredicted RBP24.91■■□□□ 1.58
LSM6-207ENST00000515311 NF2P35240 595 aa24.91■■□□□ 1.58
LSM6-207ENST00000515311 TRIM34Q9BYJ4 488 aa24.91■■□□□ 1.58
LSM6-207ENST00000515311 RNF41Q9H4P4 317 aaPredicted RBP24.91■■□□□ 1.58
LSM6-207ENST00000515311 ZNF287Q9HBT7 754 aa24.91■■□□□ 1.58
LSM6-207ENST00000515311 TRAF5O00463 557 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 FGRP09769 529 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 ZKSCAN1P17029 563 aaPredicted RBP24.9■■□□□ 1.58
LSM6-207ENST00000515311 CTDSPL2Q05D32 466 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 PDE4BQ07343 736 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 TSGA10IPQ3SY00 556 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 AKNAD1Q5T1N1 836 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 DLK2Q6UY11 383 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 TBC1D10CQ8IV04 446 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 STAG1Q8WVM7 1258 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 DYNLL2Q96FJ2 89 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 DNAJC18Q9H819 358 aa24.9■■□□□ 1.58
LSM6-207ENST00000515311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.89■■□□□ 1.58
LSM6-207ENST00000515311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.89■■□□□ 1.58
LSM6-207ENST00000515311 PAPPA2Q9BXP8 1791 aa24.88■■□□□ 1.57
LSM6-207ENST00000515311 ORC4O43929 436 aa24.88■■□□□ 1.57
LSM6-207ENST00000515311 CDK8P49336 464 aa24.88■■□□□ 1.57
LSM6-207ENST00000515311 NT5C2P49902 561 aa24.88■■□□□ 1.57
LSM6-207ENST00000515311 TATDN1Q6P1N9 297 aa24.88■■□□□ 1.57
LSM6-207ENST00000515311 MFSD6Q6ZSS7 791 aa24.88■■□□□ 1.57
LSM6-207ENST00000515311 SHMT1P34896 483 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 ANAPC15P60006 121 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 FSTL1Q12841 308 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 MIGA2Q7L4E1 593 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 SLC44A5Q8NCS7 719 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 ZNF341Q9BYN7 854 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 CNNM2Q9H8M5 875 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 TAF6LQ9Y6J9 622 aa24.87■■□□□ 1.57
LSM6-207ENST00000515311 FAM196BA6NMK8 535 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 E7EWF7 191 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 PPP1R12BO60237 982 aaPredicted RBP24.86■■□□□ 1.57
LSM6-207ENST00000515311 KRT32Q14532 448 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 RASEFQ8IZ41 740 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 MKNK2Q9HBH9 465 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 SNX14Q9Y5W7 946 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 PASKQ96RG2 1323 aa24.86■■□□□ 1.57
LSM6-207ENST00000515311 OTOFQ9HC10 1997 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 ATAD5Q96QE3 1844 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 SLURP2P0DP57 97 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 RBM25P49756 843 aaKnown RBP24.85■■□□□ 1.57
LSM6-207ENST00000515311 STK11IPQ8N1F8 1099 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 IL17RAQ96F46 866 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 C22orf23Q9BZE7 217 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 ZNF112Q9UJU3 913 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 TACC3Q9Y6A5 838 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 NEDD4P46934 1319 aa24.85■■□□□ 1.57
LSM6-207ENST00000515311 DOCK1Q14185 1865 aa24.84■■□□□ 1.57
LSM6-207ENST00000515311 PHF20L1A8MW92 1017 aa24.84■■□□□ 1.57
LSM6-207ENST00000515311 RASA1P20936 1047 aa24.84■■□□□ 1.57
LSM6-207ENST00000515311 STOX1Q6ZVD7 989 aa24.84■■□□□ 1.57
LSM6-207ENST00000515311 KRT23Q9C075 422 aa24.84■■□□□ 1.57
LSM6-207ENST00000515311 GREB1LQ9C091 1923 aaPredicted RBP24.84■■□□□ 1.57
LSM6-207ENST00000515311 PRDM1O75626 825 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 FKBP1BP68106 108 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 FMR1Q06787 632 aaKnown RBP eCLIP24.83■■□□□ 1.57
LSM6-207ENST00000515311 TRDNQ13061 729 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 MAP3K11Q16584 847 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 KLRG1Q96E93 195 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 CCDC17Q96LX7 622 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 INCENPQ9NQS7 918 aa24.83■■□□□ 1.57
LSM6-207ENST00000515311 USP2O75604 605 aaPredicted RBP24.82■■□□□ 1.56
LSM6-207ENST00000515311 CERKLQ49MI3 558 aaPredicted RBP24.82■■□□□ 1.56
LSM6-207ENST00000515311 ZNF444Q8N0Y2 327 aaPredicted RBP24.82■■□□□ 1.56
LSM6-207ENST00000515311 NCOA7Q8NI08 942 aa24.82■■□□□ 1.56
LSM6-207ENST00000515311 ESR2Q92731 530 aa24.82■■□□□ 1.56
LSM6-207ENST00000515311 TBC1D32Q96NH3 1257 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms