RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 GOLIM4O00461 696 aa29.76■■■□□ 2.35
SNF8-213ENST00000514929 FOCADQ5VW36 1801 aa29.75■■■□□ 2.35
SNF8-213ENST00000514929 TLR2O60603 784 aa29.75■■■□□ 2.35
SNF8-213ENST00000514929 OTOP1Q7RTM1 612 aa29.75■■■□□ 2.35
SNF8-213ENST00000514929 PDHXO00330 501 aa29.74■■■□□ 2.35
SNF8-213ENST00000514929 SMARCA5O60264 1052 aaPredicted RBP29.74■■■□□ 2.35
SNF8-213ENST00000514929 USP5P45974 858 aa29.74■■■□□ 2.35
SNF8-213ENST00000514929 SLC9C2Q5TAH2 1124 aa29.74■■■□□ 2.35
SNF8-213ENST00000514929 BOLA2Q9H3K6 86 aa29.74■■■□□ 2.35
SNF8-213ENST00000514929 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.74■■■□□ 2.35
SNF8-213ENST00000514929 SAP30BPQ9UHR5 308 aaKnown RBP29.74■■■□□ 2.35
SNF8-213ENST00000514929 PALD1Q9ULE6 856 aa29.74■■■□□ 2.35
SNF8-213ENST00000514929 AFG3L2Q9Y4W6 797 aa29.74■■■□□ 2.35
SNF8-213ENST00000514929 ATP5JP18859 108 aa29.73■■■□□ 2.35
SNF8-213ENST00000514929 MOGSQ13724 837 aa29.73■■■□□ 2.35
SNF8-213ENST00000514929 FASTKD5Q7L8L6 764 aaKnown RBP29.73■■■□□ 2.35
SNF8-213ENST00000514929 CRACR2BQ8N4Y2 399 aaPredicted RBP29.73■■■□□ 2.35
SNF8-213ENST00000514929 TRIM34Q9BYJ4 488 aa29.73■■■□□ 2.35
SNF8-213ENST00000514929 EFCC1Q9HA90 598 aa29.73■■■□□ 2.35
SNF8-213ENST00000514929 A0A0G2JLL6 359 aaPredicted RBP29.72■■■□□ 2.35
SNF8-213ENST00000514929 HLA-DOAP06340 250 aa29.72■■■□□ 2.35
SNF8-213ENST00000514929 PDE6AP16499 860 aa29.72■■■□□ 2.35
SNF8-213ENST00000514929 CAP2P40123 477 aa29.72■■■□□ 2.35
SNF8-213ENST00000514929 PRRT2Q7Z6L0 340 aaPredicted RBP29.72■■■□□ 2.35
SNF8-213ENST00000514929 CCDC84Q86UT8 332 aaPredicted RBP29.72■■■□□ 2.35
SNF8-213ENST00000514929 FOXP4Q8IVH2 680 aaPredicted RBP29.72■■■□□ 2.35
SNF8-213ENST00000514929 DCTPP1Q9H773 170 aa29.72■■■□□ 2.35
SNF8-213ENST00000514929 PAG1Q9NWQ8 432 aa29.72■■■□□ 2.35
SNF8-213ENST00000514929 TRIM75PA6NK02 468 aa29.71■■■□□ 2.35
SNF8-213ENST00000514929 ARHGEF6Q15052 776 aa29.71■■■□□ 2.35
SNF8-213ENST00000514929 GADL1Q6ZQY3 521 aa29.71■■■□□ 2.35
SNF8-213ENST00000514929 EDC3Q96F86 508 aaKnown RBP29.71■■■□□ 2.35
SNF8-213ENST00000514929 MAGEB6P1A0A0J9YX57 407 aa29.7■■■□□ 2.35
SNF8-213ENST00000514929 SLC4A8Q2Y0W8 1093 aa29.7■■■□□ 2.35
SNF8-213ENST00000514929 SIPA1L1O43166 1804 aa29.7■■■□□ 2.34
SNF8-213ENST00000514929 ZNF532Q9HCE3 1301 aa29.7■■■□□ 2.34
SNF8-213ENST00000514929 PHIPQ8WWQ0 1821 aa29.69■■■□□ 2.34
SNF8-213ENST00000514929 RRP1BQ14684 758 aaKnown RBP29.69■■■□□ 2.34
SNF8-213ENST00000514929 GPAT2Q6NUI2 795 aa29.69■■■□□ 2.34
SNF8-213ENST00000514929 HAUS7Q99871 368 aa29.69■■■□□ 2.34
SNF8-213ENST00000514929 RIOK1Q9BRS2 568 aaKnown RBP29.69■■■□□ 2.34
SNF8-213ENST00000514929 KIF22Q14807 665 aa29.68■■■□□ 2.34
SNF8-213ENST00000514929 PARK7Q99497 189 aaKnown RBP29.68■■■□□ 2.34
SNF8-213ENST00000514929 CPA4Q9UI42 421 aa29.68■■■□□ 2.34
SNF8-213ENST00000514929 PTPN22Q9Y2R2 807 aa29.68■■■□□ 2.34
SNF8-213ENST00000514929 PCDHB15Q9Y5E8 787 aa29.68■■■□□ 2.34
SNF8-213ENST00000514929 ATAD5Q96QE3 1844 aa29.68■■■□□ 2.34
SNF8-213ENST00000514929 SOX10P56693 466 aa29.67■■■□□ 2.34
SNF8-213ENST00000514929 CAP1Q01518 475 aa29.67■■■□□ 2.34
SNF8-213ENST00000514929 METTL16Q86W50 562 aaKnown RBP29.67■■■□□ 2.34
SNF8-213ENST00000514929 TBC1D2Q9BYX2 928 aa29.67■■■□□ 2.34
SNF8-213ENST00000514929 DNAJC18Q9H819 358 aa29.67■■■□□ 2.34
SNF8-213ENST00000514929 USP17L5A8MUK1 530 aa29.66■■■□□ 2.34
SNF8-213ENST00000514929 RGS19P49795 217 aa29.66■■■□□ 2.34
SNF8-213ENST00000514929 SPP2Q13103 211 aa29.66■■■□□ 2.34
SNF8-213ENST00000514929 C17orf99Q6UX52 265 aa29.66■■■□□ 2.34
SNF8-213ENST00000514929 ZNF280CQ8ND82 737 aa29.66■■■□□ 2.34
SNF8-213ENST00000514929 CRNKL1Q9BZJ0 848 aaKnown RBP29.66■■■□□ 2.34
SNF8-213ENST00000514929 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.66■■■□□ 2.34
SNF8-213ENST00000514929 MYH1P12882 1939 aa29.66■■■□□ 2.34
SNF8-213ENST00000514929 ASNSP08243 561 aa29.65■■■□□ 2.34
SNF8-213ENST00000514929 LACTBP83111 547 aaPredicted RBP29.65■■■□□ 2.34
SNF8-213ENST00000514929 CRBNQ96SW2 442 aa29.65■■■□□ 2.34
SNF8-213ENST00000514929 AS3MTQ9HBK9 375 aa29.65■■■□□ 2.34
SNF8-213ENST00000514929 ECHDC1Q9NTX5 307 aa29.65■■■□□ 2.34
SNF8-213ENST00000514929 PTPRFP10586 1907 aa29.65■■■□□ 2.34
SNF8-213ENST00000514929 TCRBV5S4A2TA0A5A2 114 aa29.64■■■□□ 2.34
SNF8-213ENST00000514929 CYP2C8P10632 490 aa29.64■■■□□ 2.34
SNF8-213ENST00000514929 TTC6Q86TZ1 520 aa29.64■■■□□ 2.34
SNF8-213ENST00000514929 GPATCH3Q96I76 525 aa29.64■■■□□ 2.34
SNF8-213ENST00000514929 SLC45A1Q9Y2W3 748 aa29.63■■■□□ 2.33
SNF8-213ENST00000514929 ADGRA2Q96PE1 1338 aa29.63■■■□□ 2.33
SNF8-213ENST00000514929 GDF11O95390 407 aa29.62■■■□□ 2.33
SNF8-213ENST00000514929 ADD2P35612 726 aa29.62■■■□□ 2.33
SNF8-213ENST00000514929 MLLT1Q03111 559 aaPredicted RBP29.62■■■□□ 2.33
SNF8-213ENST00000514929 ARHGAP39Q9C0H5 1083 aa29.62■■■□□ 2.33
SNF8-213ENST00000514929 SERPINB13Q9UIV8 391 aa29.62■■■□□ 2.33
SNF8-213ENST00000514929 AGTPBP1Q9UPW5 1226 aa29.62■■■□□ 2.33
SNF8-213ENST00000514929 ECM2O94769 699 aaPredicted RBP29.61■■■□□ 2.33
SNF8-213ENST00000514929 LCORLQ8N3X6 602 aa29.61■■■□□ 2.33
SNF8-213ENST00000514929 PROCA1Q8NCQ7 364 aaPredicted RBP29.61■■■□□ 2.33
SNF8-213ENST00000514929 EHD4Q9H223 541 aa29.61■■■□□ 2.33
SNF8-213ENST00000514929 GINM1Q9NU53 330 aa29.61■■■□□ 2.33
SNF8-213ENST00000514929 POLR3DP05423 398 aaPredicted RBP29.6■■■□□ 2.33
SNF8-213ENST00000514929 HMGCS2P54868 508 aa29.6■■■□□ 2.33
SNF8-213ENST00000514929 NAV1Q8NEY1 1877 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 JAG1P78504 1218 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 SLFNL1Q499Z3 407 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 ZSCAN25Q6NSZ9 544 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 SMCR8Q8TEV9 937 aaPredicted RBP29.59■■■□□ 2.33
SNF8-213ENST00000514929 WDR18Q9BV38 432 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 ARMT1Q9H993 441 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 ZBTB21Q9ULJ3 1066 aa29.59■■■□□ 2.33
SNF8-213ENST00000514929 ZSWIM8A7E2V4 1837 aa29.58■■■□□ 2.33
SNF8-213ENST00000514929 MBD4O95243 580 aa29.58■■■□□ 2.33
SNF8-213ENST00000514929 GNRH1P01148 92 aa29.58■■■□□ 2.33
SNF8-213ENST00000514929 SHROOM1Q2M3G4 852 aaPredicted RBP29.58■■■□□ 2.33
SNF8-213ENST00000514929 TREML2Q5T2D2 321 aa29.58■■■□□ 2.33
SNF8-213ENST00000514929 SDR42E1Q8WUS8 393 aa29.58■■■□□ 2.33
SNF8-213ENST00000514929 MCM9Q9NXL9 1143 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms