RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 ZC3H12CQ9C0D7 883 aaKnown RBP7.41□□□□□ -1.22
RFC1-216ENST00000514572 JPH1Q9HDC5 661 aaPredicted RBP7.41□□□□□ -1.22
RFC1-216ENST00000514572 PCDH12Q9NPG4 1184 aa7.41□□□□□ -1.22
RFC1-216ENST00000514572 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
RFC1-216ENST00000514572 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
RFC1-216ENST00000514572 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
RFC1-216ENST00000514572 LTBP3Q9NS15 1303 aa7.41□□□□□ -1.22
RFC1-216ENST00000514572 LINC01387J3KSC0 135 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 RAB11FIP3O75154 756 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 IGBP1P78318 339 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
RFC1-216ENST00000514572 HDXQ7Z353 690 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.22
RFC1-216ENST00000514572 WDR89Q96FK6 387 aaPredicted RBP7.4□□□□□ -1.22
RFC1-216ENST00000514572 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 SPC25Q9HBM1 224 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 PRDM6Q9NQX0 595 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 ADAM30Q9UKF2 790 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 SYNGAP1Q96PV0 1343 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 IGF1RP08069 1367 aa7.4□□□□□ -1.22
RFC1-216ENST00000514572 DDAH1O94760 285 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 CDC25BP30305 580 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 ARL4DP49703 201 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 SETDB1Q15047 1291 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 RNFT1Q5M7Z0 435 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 UNC5AQ6ZN44 842 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
RFC1-216ENST00000514572 NLRC3Q7RTR2 1065 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 KLHDC7BQ96G42 594 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 SLC9A7Q96T83 725 aa7.39□□□□□ -1.23
RFC1-216ENST00000514572 PHAXQ9H814 394 aaKnown RBP7.39□□□□□ -1.23
RFC1-216ENST00000514572 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 LOC100289279A0A1B0GTE1 492 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 ADCY3O60266 1144 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 VIL1P09327 827 aaKnown RBP7.38□□□□□ -1.23
RFC1-216ENST00000514572 ALAS2P22557 587 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 NTF4P34130 210 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 GYS2P54840 703 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
RFC1-216ENST00000514572 NCAPHQ15003 741 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 SYNPOQ8N3V7 929 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 KLHL23Q8NBE8 558 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 GALNT11Q8NCW6 608 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 KLHL6Q8WZ60 621 aa7.38□□□□□ -1.23
RFC1-216ENST00000514572 ADAM11O75078 769 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 DLGAP3O95886 979 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 PLCG1P19174 1290 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 IBSPP21815 317 aaPredicted RBP7.37□□□□□ -1.23
RFC1-216ENST00000514572 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
RFC1-216ENST00000514572 PDE4BQ07343 736 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
RFC1-216ENST00000514572 LONRF2Q1L5Z9 754 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 SLC10A6Q3KNW5 377 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 MSL1Q68DK7 614 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 EEPD1Q7L9B9 569 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
RFC1-216ENST00000514572 WDR18Q9BV38 432 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 CARD10Q9BWT7 1032 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 SLKQ9H2G2 1235 aaPredicted RBP7.37□□□□□ -1.23
RFC1-216ENST00000514572 PFDN2Q9UHV9 154 aa7.37□□□□□ -1.23
RFC1-216ENST00000514572 LILRB5O75023 590 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 LIG1P18858 919 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 AMPD3Q01432 767 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 MLECQ14165 292 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 SUZ12Q15022 739 aaKnown RBP7.36□□□□□ -1.23
RFC1-216ENST00000514572 VHLLQ6RSH7 139 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 EPN3Q9H201 632 aa7.36□□□□□ -1.23
RFC1-216ENST00000514572 ZNF214Q9UL59 606 aaPredicted RBP7.36□□□□□ -1.23
RFC1-216ENST00000514572 DCDC2CA8MYV0 355 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 M0R082 166 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 SUSD5O60279 629 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 GRK4P32298 578 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 MASP1P48740 699 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 ERVK-24P63145 666 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 SRSF11Q05519 484 aaKnown RBP7.35□□□□□ -1.23
RFC1-216ENST00000514572 PDE3AQ14432 1141 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 TCEA2Q15560 299 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 DALRD3Q5D0E6 543 aaKnown RBP7.35□□□□□ -1.23
RFC1-216ENST00000514572 TMEM67Q5HYA8 995 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 C8orf86Q6ZUL3 223 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 MAP4K3Q8IVH8 894 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 SLFN12Q8IYM2 578 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 ZNF417Q8TAU3 575 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 ACDQ96AP0 544 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 ELMO3Q96BJ8 720 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 ZNF587Q96SQ5 575 aaPredicted RBP7.35□□□□□ -1.23
RFC1-216ENST00000514572 WNT10AQ9GZT5 417 aa7.35□□□□□ -1.23
RFC1-216ENST00000514572 CHURC1-FNTBB4DL54 471 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 PPP1R12AO14974 1030 aaPredicted RBP7.34□□□□□ -1.23
RFC1-216ENST00000514572 AOC2O75106 756 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 FAM153BP0C7A2 387 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 NID1P14543 1247 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 CCNFP41002 786 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 ANAPC15P60006 121 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 HNRNPUQ00839 825 aaKnown RBP eCLIP7.34□□□□□ -1.23
RFC1-216ENST00000514572 KRT76Q01546 638 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms