RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 CIAO1O76071 339 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 PICALMQ13492 652 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 SPTY2D1Q68D10 685 aaPredicted RBP12.67□□□□□ -0.38
DDR1-276ENST00000514534 ATG9AQ7Z3C6 839 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 ZNF280CQ8ND82 737 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
DDR1-276ENST00000514534 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDR1-276ENST00000514534 GJD2Q9UKL4 321 aa12.67□□□□□ -0.38
DDR1-276ENST00000514534 BTDP43251 543 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 PHKA1P46020 1223 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 SPP2Q13103 211 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
DDR1-276ENST00000514534 TRMT44Q8IYL2 757 aaKnown RBP12.66□□□□□ -0.38
DDR1-276ENST00000514534 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
DDR1-276ENST00000514534 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
DDR1-276ENST00000514534 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 LAMA3Q16787 3333 aa12.66□□□□□ -0.38
DDR1-276ENST00000514534 MROH7-TTC4A0A0A0MT08 1334 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 PDS5AQ29RF7 1337 aaKnown RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 MAP4K4O95819 1239 aaPredicted RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 CYP2B6P20813 491 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 HMGCS2P54868 508 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 TRIM32Q13049 653 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDR1-276ENST00000514534 TRIB2Q92519 343 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 SIL1Q9H173 461 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.38
DDR1-276ENST00000514534 MORF4L1Q9UBU8 362 aa12.65□□□□□ -0.38
DDR1-276ENST00000514534 PFASO15067 1338 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
DDR1-276ENST00000514534 IRX3P78415 501 aaPredicted RBP12.64□□□□□ -0.39
DDR1-276ENST00000514534 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 MAP3K21Q5TCX8 1036 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
DDR1-276ENST00000514534 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
DDR1-276ENST00000514534 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
DDR1-276ENST00000514534 GPR75-ASB3A0A0A6YYF3 556 aa12.63□□□□□ -0.39
DDR1-276ENST00000514534 LDHCP07864 332 aa12.63□□□□□ -0.39
DDR1-276ENST00000514534 ZKSCAN1P17029 563 aaPredicted RBP12.63□□□□□ -0.39
DDR1-276ENST00000514534 CAP2P40123 477 aa12.63□□□□□ -0.39
DDR1-276ENST00000514534 PDE3AQ14432 1141 aa12.63□□□□□ -0.39
DDR1-276ENST00000514534 TMOD4Q9NZQ9 345 aa12.63□□□□□ -0.39
DDR1-276ENST00000514534 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 UBTFL1P0CB47 393 aaPredicted RBP12.62□□□□□ -0.39
DDR1-276ENST00000514534 COL6A1P12109 1028 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 MAPK4P31152 587 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 RHBDL3P58872 404 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 GSTO1P78417 241 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
DDR1-276ENST00000514534 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
DDR1-276ENST00000514534 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
DDR1-276ENST00000514534 GTF3C2Q8WUA4 911 aaPredicted RBP12.62□□□□□ -0.39
DDR1-276ENST00000514534 LBHD1Q9BQE6 289 aaPredicted RBP12.62□□□□□ -0.39
DDR1-276ENST00000514534 HERC5Q9UII4 1024 aaKnown RBP12.62□□□□□ -0.39
DDR1-276ENST00000514534 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
DDR1-276ENST00000514534 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
DDR1-276ENST00000514534 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
DDR1-276ENST00000514534 MECOMQ03112 1051 aa12.61□□□□□ -0.39
DDR1-276ENST00000514534 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
DDR1-276ENST00000514534 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
DDR1-276ENST00000514534 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
DDR1-276ENST00000514534 C19orf81C9J6K1 198 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 ASNSP08243 561 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 ADORA1P30542 326 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 RGS2P41220 211 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 BACE1P56817 501 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 CACNB2Q08289 660 aaPredicted RBP12.6□□□□□ -0.39
DDR1-276ENST00000514534 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
DDR1-276ENST00000514534 LRRC26Q2I0M4 334 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 GUCD1Q96NT3 240 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 PI4KBQ9UBF8 816 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
DDR1-276ENST00000514534 A0A1B0GUL7 405 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 HERVK_113P62684 666 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 MTMR2Q13614 643 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 LHX8Q68G74 356 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
DDR1-276ENST00000514534 APBA2Q99767 749 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 NOL10Q9BSC4 688 aaKnown RBP12.59□□□□□ -0.39
DDR1-276ENST00000514534 DHX36Q9H2U1 1008 aaKnown RBP12.59□□□□□ -0.39
DDR1-276ENST00000514534 CWC22Q9HCG8 908 aaKnown RBP12.59□□□□□ -0.39
DDR1-276ENST00000514534 GINM1Q9NU53 330 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 PRKAG2Q9UGJ0 569 aa12.59□□□□□ -0.39
DDR1-276ENST00000514534 A0A0C4DFX4 3053 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms