RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 BAG3O95817 575 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 CETPP11597 493 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 PTPRAP18433 802 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 OTUD7BQ6GQQ9 843 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 CCDC84Q86UT8 332 aaPredicted RBP10.64□□□□□ -0.71
HERC4-214ENST00000513996 MAPKAPK5Q8IW41 473 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 SCYL3Q8IZE3 742 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 MIGA1Q8NAN2 632 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.64□□□□□ -0.71
HERC4-214ENST00000513996 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
HERC4-214ENST00000513996 CTNND1O60716 968 aaKnown RBP10.63□□□□□ -0.71
HERC4-214ENST00000513996 IGSF3O75054 1194 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 ATP5JP18859 108 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 JAG1P78504 1218 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 GPAT2Q6NUI2 795 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 DNAJC2Q99543 621 aaKnown RBP10.63□□□□□ -0.71
HERC4-214ENST00000513996 NOL10Q9BSC4 688 aaKnown RBP10.63□□□□□ -0.71
HERC4-214ENST00000513996 BOLA2Q9H3K6 86 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 ZHX2Q9Y6X8 837 aa10.63□□□□□ -0.71
HERC4-214ENST00000513996 LAMB1P07942 1786 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 FLT1P17948 1338 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 TCRBV5S4A2TA0A5A2 114 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 GOLIM4O00461 696 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 CXCL11O14625 94 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 CHGBP05060 677 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 PDE6AP16499 860 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 PLCG2P16885 1265 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 MAP3K12Q12852 859 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 TAF1CQ15572 869 aaPredicted RBP10.62□□□□□ -0.71
HERC4-214ENST00000513996 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
HERC4-214ENST00000513996 RIOK1Q9BRS2 568 aaKnown RBP10.62□□□□□ -0.71
HERC4-214ENST00000513996 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 DNAJC18Q9H819 358 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.62□□□□□ -0.71
HERC4-214ENST00000513996 SAP30BPQ9UHR5 308 aaKnown RBP10.62□□□□□ -0.71
HERC4-214ENST00000513996 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
HERC4-214ENST00000513996 CAP2P40123 477 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 SP3Q02447 781 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 TTF1Q15361 905 aaPredicted RBP10.61□□□□□ -0.71
HERC4-214ENST00000513996 SHROOM1Q2M3G4 852 aaPredicted RBP10.61□□□□□ -0.71
HERC4-214ENST00000513996 SLC4A8Q2Y0W8 1093 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 ANKRD23Q86SG2 305 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 CD99L2Q8TCZ2 262 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 HAUS7Q99871 368 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 DHX36Q9H2U1 1008 aaKnown RBP10.61□□□□□ -0.71
HERC4-214ENST00000513996 ZFYVE28Q9HCC9 887 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 PI4KBQ9UBF8 816 aa10.61□□□□□ -0.71
HERC4-214ENST00000513996 COL2A1P02458 1487 aaPredicted RBP10.61□□□□□ -0.71
HERC4-214ENST00000513996 ZNF532Q9HCE3 1301 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 A0A0G2JLL6 359 aaPredicted RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 PDHXO00330 501 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 TLR2O60603 784 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 EVX2Q03828 476 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 PKN2Q16513 984 aaKnown RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 OTOP1Q7RTM1 612 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 PRRT2Q7Z6L0 340 aaPredicted RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 PICK1Q9NRD5 415 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 PAG1Q9NWQ8 432 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 HERC5Q9UII4 1024 aaKnown RBP10.6□□□□□ -0.71
HERC4-214ENST00000513996 HPS5Q9UPZ3 1129 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 TRIM17Q9Y577 477 aa10.6□□□□□ -0.71
HERC4-214ENST00000513996 DOCK2Q92608 1830 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 MAGEB6P1A0A0J9YX57 407 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 CTGFP29279 349 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 USP5P45974 858 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 TSHZ3Q63HK5 1081 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 FBXO46Q6PJ61 603 aaPredicted RBP10.59□□□□□ -0.71
HERC4-214ENST00000513996 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 OTUD7AQ8TE49 926 aaPredicted RBP10.59□□□□□ -0.71
HERC4-214ENST00000513996 ERO1AQ96HE7 468 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 ARHGAP39Q9C0H5 1083 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 CPA4Q9UI42 421 aa10.59□□□□□ -0.71
HERC4-214ENST00000513996 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
HERC4-214ENST00000513996 SIPA1L1O43166 1804 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 CDK5RAP2Q96SN8 1893 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 PRKAB2O43741 272 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 CYP2C8P10632 490 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 ADD2P35612 726 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 RGS19P49795 217 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 PLCD1P51178 756 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 SPP2Q13103 211 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 TMED8Q6PL24 325 aaPredicted RBP10.58□□□□□ -0.72
HERC4-214ENST00000513996 LCORLQ8N3X6 602 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 ECHDC1Q9NTX5 307 aa10.58□□□□□ -0.72
HERC4-214ENST00000513996 PHIPQ8WWQ0 1821 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 USP17L5A8MUK1 530 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 ECM2O94769 699 aaPredicted RBP10.57□□□□□ -0.72
HERC4-214ENST00000513996 GDF11O95390 407 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms