RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 WDR66Q8TBY9 1149 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 PRKRIP1Q9H875 184 aaPredicted RBP11.3□□□□□ -0.6
CAST-239ENST00000513666 FANCIQ9NVI1 1328 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 DOCK1Q14185 1865 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
CAST-239ENST00000513666 DIXDC1Q155Q3 683 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 FAM109BQ6ICB4 259 aaPredicted RBP11.3□□□□□ -0.6
CAST-239ENST00000513666 ZFPM1Q8IX07 1006 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 HMX1Q9NP08 348 aaPredicted RBP11.3□□□□□ -0.6
CAST-239ENST00000513666 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 OGDHLQ9ULD0 1010 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
CAST-239ENST00000513666 COL2A1P02458 1487 aaPredicted RBP11.29□□□□□ -0.6
CAST-239ENST00000513666 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
CAST-239ENST00000513666 FGFR2P21802 821 aa11.29□□□□□ -0.6
CAST-239ENST00000513666 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
CAST-239ENST00000513666 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
CAST-239ENST00000513666 GUCD1Q96NT3 240 aa11.29□□□□□ -0.6
CAST-239ENST00000513666 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
CAST-239ENST00000513666 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
CAST-239ENST00000513666 UTYO14607 1347 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 PFASO15067 1338 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 TRIM75PA6NK02 468 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
CAST-239ENST00000513666 ENTPD3O75355 529 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
CAST-239ENST00000513666 PRDX5P30044 214 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
CAST-239ENST00000513666 TRIM32Q13049 653 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
CAST-239ENST00000513666 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 IDI2Q9BXS1 227 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
CAST-239ENST00000513666 GJD2Q9UKL4 321 aa11.28□□□□□ -0.6
CAST-239ENST00000513666 LRRFIP2Q9Y608 721 aaKnown RBP11.28□□□□□ -0.6
CAST-239ENST00000513666 PLXNB2O15031 1838 aa11.27□□□□□ -0.6
CAST-239ENST00000513666 RFX7Q2KHR2 1363 aa11.27□□□□□ -0.6
CAST-239ENST00000513666 RGS3P49796 1198 aa11.27□□□□□ -0.61
CAST-239ENST00000513666 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
CAST-239ENST00000513666 TREML2Q5T2D2 321 aa11.27□□□□□ -0.61
CAST-239ENST00000513666 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.61
CAST-239ENST00000513666 PROCA1Q8NCQ7 364 aaPredicted RBP11.27□□□□□ -0.61
CAST-239ENST00000513666 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
CAST-239ENST00000513666 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
CAST-239ENST00000513666 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
CAST-239ENST00000513666 COL6A1P12109 1028 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 SLC5A1P13866 664 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 GCLCP48506 637 aaPredicted RBP11.26□□□□□ -0.61
CAST-239ENST00000513666 MAP3K21Q5TCX8 1036 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 TRIB2Q92519 343 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 SCUBE2Q9NQ36 999 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
CAST-239ENST00000513666 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
CAST-239ENST00000513666 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
CAST-239ENST00000513666 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
CAST-239ENST00000513666 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
CAST-239ENST00000513666 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
CAST-239ENST00000513666 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
CAST-239ENST00000513666 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
CAST-239ENST00000513666 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
CAST-239ENST00000513666 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
CAST-239ENST00000513666 ZSCAN29Q8IWY8 852 aaPredicted RBP11.25□□□□□ -0.61
CAST-239ENST00000513666 LPIN2Q92539 896 aa11.25□□□□□ -0.61
CAST-239ENST00000513666 GAKO14976 1311 aa11.24□□□□□ -0.61
CAST-239ENST00000513666 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.61
CAST-239ENST00000513666 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
CAST-239ENST00000513666 MORF4L1Q9UBU8 362 aa11.24□□□□□ -0.61
CAST-239ENST00000513666 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
CAST-239ENST00000513666 EYA2O00167 538 aa11.23□□□□□ -0.61
CAST-239ENST00000513666 XRCC5P13010 732 aaKnown RBP11.23□□□□□ -0.61
CAST-239ENST00000513666 CYP2B6P20813 491 aa11.23□□□□□ -0.61
CAST-239ENST00000513666 PSEN1P49768 467 aa11.23□□□□□ -0.61
CAST-239ENST00000513666 ZNF697Q5TEC3 545 aa11.23□□□□□ -0.61
CAST-239ENST00000513666 WDR63Q8IWG1 891 aa11.23□□□□□ -0.61
CAST-239ENST00000513666 TBC1D2Q9BYX2 928 aa11.23□□□□□ -0.61
CAST-239ENST00000513666 ASCC2Q9H1I8 757 aaPredicted RBP11.23□□□□□ -0.61
CAST-239ENST00000513666 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
CAST-239ENST00000513666 SPTBN5Q9NRC6 3674 aaKnown RBP11.23□□□□□ -0.61
CAST-239ENST00000513666 GNL3LQ9NVN8 582 aaKnown RBP11.23□□□□□ -0.61
CAST-239ENST00000513666 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 TBC1D12O60347 775 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 PLCG2P16885 1265 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 HMGCS2P54868 508 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 SPP2Q13103 211 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
CAST-239ENST00000513666 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 SOCS4Q8WXH5 440 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
CAST-239ENST00000513666 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 DENND2AQ9ULE3 1009 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 MAST2Q6P0Q8 1798 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 VCANP13611 3396 aa11.22□□□□□ -0.61
CAST-239ENST00000513666 SEMA3EO15041 775 aa11.21□□□□□ -0.61
CAST-239ENST00000513666 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
CAST-239ENST00000513666 CACNB2Q08289 660 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms