RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 NRG2O14511 850 aaPredicted RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 GFRA3O60609 400 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 ICMTO60725 284 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 GMPSP49915 693 aaPredicted RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 EIF6P56537 245 aaKnown RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 SCARF1Q14162 830 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 PKDCCQ504Y2 493 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 HABP4Q5JVS0 413 aaKnown RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 IL17REQ8NFR9 667 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 JDP2Q8WYK2 163 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 PSMD1Q99460 953 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 RNF186Q9NXI6 227 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 GPRC5DQ9NZD1 345 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 ZNF232Q9UNY5 417 aa6.51□□□□□ -1.37
HTT-211ENST00000513326 DNMT3AQ9Y6K1 912 aaPredicted RBP6.51□□□□□ -1.37
HTT-211ENST00000513326 NPC1L1Q9UHC9 1359 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 H3BRB1 525 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 TRPA1O75762 1119 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 EGFRP00533 1210 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 CTSOP43234 321 aaPredicted RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 HUNKP57058 714 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 KIF23Q02241 960 aaPredicted RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 ZNF211Q13398 564 aaPredicted RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 HLFQ16534 295 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 AOC3Q16853 763 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 C6orf118Q5T5N4 469 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 FOXD4L5Q5VV16 416 aaPredicted RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 C16orf46Q6P387 395 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 NBPF10Q6P3W6 841 aaKnown RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 ZNF790Q6PG37 636 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 GLYCTKQ8IVS8 523 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 TTC5Q8N0Z6 440 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 HELQQ8TDG4 1101 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 ZDHHC1Q8WTX9 485 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 TUT1Q9H6E5 874 aaKnown RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 USP16Q9Y5T5 823 aa6.5□□□□□ -1.37
HTT-211ENST00000513326 MKI67P46013 3256 aaKnown RBP6.5□□□□□ -1.37
HTT-211ENST00000513326 SPATA31C2B4DYI2 1134 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 ADM5C9JUS6 153 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 FXR1P51114 621 aaKnown RBP eCLIP6.49□□□□□ -1.37
HTT-211ENST00000513326 CXCL9Q07325 125 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 NOGQ13253 232 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 LAPTM4AQ15012 233 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 CRY2Q49AN0 593 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 CTU1Q7Z7A3 348 aaKnown RBP6.49□□□□□ -1.37
HTT-211ENST00000513326 USP48Q86UV5 1035 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 MYO19Q96H55 970 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 HHIPL1Q96JK4 782 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 PANK3Q9H999 370 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 ANO2Q9NQ90 1003 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 ADARB2Q9NS39 739 aaKnown RBP6.49□□□□□ -1.37
HTT-211ENST00000513326 BIN2Q9UBW5 565 aaPredicted RBP6.49□□□□□ -1.37
HTT-211ENST00000513326 PGAP2Q9UHJ9 254 aa6.49□□□□□ -1.37
HTT-211ENST00000513326 NIP7Q9Y221 180 aaKnown RBP eCLIP6.49□□□□□ -1.37
HTT-211ENST00000513326 ASTN2O75129 1339 aaPredicted RBP6.49□□□□□ -1.37
HTT-211ENST00000513326 AXIN1O15169 862 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 PPIP5K2O43314 1243 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 RAD17O75943 681 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 C4orf17Q53FE4 359 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 WDR44Q5JSH3 913 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 COX20Q5RI15 118 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 SH3PXD2AQ5TCZ1 1133 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 C1orf53Q5VUE5 145 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 MORC1Q86VD1 984 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 NIM1KQ8IY84 436 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 ALDH16A1Q8IZ83 802 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 RNF217Q8TC41 542 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 SAP130Q9H0E3 1048 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 HCN4Q9Y3Q4 1203 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 RIC1Q4ADV7 1423 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 UBN2Q6ZU65 1347 aa6.48□□□□□ -1.37
HTT-211ENST00000513326 COL4A1P02462 1669 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 TTLL8A6PVC2 850 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 YDJCA8MPS7 323 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 FAM13AO94988 1023 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 BMP1P13497 986 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 NPR3P17342 541 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 RTN1Q16799 776 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 RGMBQ6NW40 437 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 LYSMD3Q7Z3D4 306 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 FMNL2Q96PY5 1086 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 CSRNP1Q96S65 589 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 SAGE1Q9NXZ1 904 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 STIM2Q9P246 746 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 DUOX1Q9NRD9 1551 aa6.47□□□□□ -1.37
HTT-211ENST00000513326 COL3A1P02461 1466 aaPredicted RBP6.47□□□□□ -1.37
HTT-211ENST00000513326 TRIOBPQ9H2D6 2365 aa6.46□□□□□ -1.37
HTT-211ENST00000513326 HTTP42858 3142 aa6.46□□□□□ -1.37
HTT-211ENST00000513326 POLR2AP24928 1970 aaKnown RBP6.46□□□□□ -1.37
HTT-211ENST00000513326 GPTP24298 496 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 ALDH1B1P30837 517 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 PLA2G4AP47712 749 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 POU4F2Q12837 409 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 ECM1Q16610 540 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 CLEC4GQ6UXB4 293 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms