RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDR1-272ENST00000513243 PICK1Q9NRD5 415 aa21.48■■□□□ 1.03
DDR1-272ENST00000513243 HERC5Q9UII4 1024 aaKnown RBP21.48■■□□□ 1.03
DDR1-272ENST00000513243 FOCADQ5VW36 1801 aa21.48■■□□□ 1.03
DDR1-272ENST00000513243 PTPRAP18433 802 aa21.47■■□□□ 1.03
DDR1-272ENST00000513243 RRP1BQ14684 758 aaKnown RBP21.47■■□□□ 1.03
DDR1-272ENST00000513243 IFFO2Q5TF58 517 aa21.47■■□□□ 1.03
DDR1-272ENST00000513243 FOXP4Q8IVH2 680 aaPredicted RBP21.47■■□□□ 1.03
DDR1-272ENST00000513243 KCNH4Q9UQ05 1017 aa21.47■■□□□ 1.03
DDR1-272ENST00000513243 TTC41PQ6P2S7 1318 aa21.47■■□□□ 1.03
DDR1-272ENST00000513243 GPR25O00155 361 aa21.46■■□□□ 1.03
DDR1-272ENST00000513243 UBE3CQ15386 1083 aa21.46■■□□□ 1.03
DDR1-272ENST00000513243 NOM1Q5C9Z4 860 aaKnown RBP21.46■■□□□ 1.03
DDR1-272ENST00000513243 METTL16Q86W50 562 aaKnown RBP21.46■■□□□ 1.03
DDR1-272ENST00000513243 FAM43AQ8N2R8 423 aa21.46■■□□□ 1.03
DDR1-272ENST00000513243 LCORLQ8N3X6 602 aa21.46■■□□□ 1.03
DDR1-272ENST00000513243 PI4K2BQ8TCG2 481 aa21.46■■□□□ 1.03
DDR1-272ENST00000513243 ZNF296Q8WUU4 475 aaPredicted RBP21.46■■□□□ 1.03
DDR1-272ENST00000513243 RWDD1Q9H446 243 aaPredicted RBP21.46■■□□□ 1.03
DDR1-272ENST00000513243 ZHX2Q9Y6X8 837 aa21.46■■□□□ 1.03
DDR1-272ENST00000513243 IGHDP01880 384 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 MX1P20591 662 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 CRHR2Q13324 411 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 SLC4A8Q2Y0W8 1093 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 CRNKL1Q9BZJ0 848 aaKnown RBP21.45■■□□□ 1.02
DDR1-272ENST00000513243 DNAJC18Q9H819 358 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.45■■□□□ 1.02
DDR1-272ENST00000513243 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
DDR1-272ENST00000513243 SALL3Q9BXA9 1300 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 SIPA1L1O43166 1804 aa21.45■■□□□ 1.02
DDR1-272ENST00000513243 BTBD19C9JJ37 291 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 HLA-DOAP06340 250 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 CAP2P40123 477 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 IRX6P78412 446 aaPredicted RBP21.44■■□□□ 1.02
DDR1-272ENST00000513243 ZSCAN25Q6NSZ9 544 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 SMC5Q8IY18 1101 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 CRACR2BQ8N4Y2 399 aaPredicted RBP21.44■■□□□ 1.02
DDR1-272ENST00000513243 KBTBD3Q8NAB2 608 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 ARMT1Q9H993 441 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 AFG3L2Q9Y4W6 797 aa21.44■■□□□ 1.02
DDR1-272ENST00000513243 CXCL11O14625 94 aa21.43■■□□□ 1.02
DDR1-272ENST00000513243 ERC2O15083 957 aa21.43■■□□□ 1.02
DDR1-272ENST00000513243 GLRX3O76003 335 aaKnown RBP21.43■■□□□ 1.02
DDR1-272ENST00000513243 MBD4O95243 580 aa21.43■■□□□ 1.02
DDR1-272ENST00000513243 MOGSQ13724 837 aa21.43■■□□□ 1.02
DDR1-272ENST00000513243 CCDC84Q86UT8 332 aaPredicted RBP21.43■■□□□ 1.02
DDR1-272ENST00000513243 DOCK1Q14185 1865 aa21.42■■□□□ 1.02
DDR1-272ENST00000513243 SDR42E1Q8WUS8 393 aa21.42■■□□□ 1.02
DDR1-272ENST00000513243 TRIM34Q9BYJ4 488 aa21.42■■□□□ 1.02
DDR1-272ENST00000513243 PRKAB2O43741 272 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 FKTNO75072 461 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 JAG1P78504 1218 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 DGKZQ13574 1117 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 TAF1CQ15572 869 aaPredicted RBP21.41■■□□□ 1.02
DDR1-272ENST00000513243 TTC6Q86TZ1 520 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 MCOLN1Q9GZU1 580 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 PUS7LQ9H0K6 701 aaKnown RBP21.41■■□□□ 1.02
DDR1-272ENST00000513243 ZCCHC17Q9NP64 241 aaKnown RBP21.41■■□□□ 1.02
DDR1-272ENST00000513243 DCP1AQ9NPI6 582 aaPredicted RBP21.41■■□□□ 1.02
DDR1-272ENST00000513243 MYH1P12882 1939 aa21.41■■□□□ 1.02
DDR1-272ENST00000513243 PLCD1P51178 756 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 LNPKQ9C0E8 428 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 EHD4Q9H223 541 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 ZFYVE28Q9HCC9 887 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 MCM9Q9NXL9 1143 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 STAP2Q9UGK3 403 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 SERPINB13Q9UIV8 391 aa21.4■■□□□ 1.02
DDR1-272ENST00000513243 MYH7P12883 1935 aa21.39■■□□□ 1.02
DDR1-272ENST00000513243 A0A0G2JLL6 359 aaPredicted RBP21.39■■□□□ 1.01
DDR1-272ENST00000513243 TRIM75PA6NK02 468 aa21.39■■□□□ 1.01
DDR1-272ENST00000513243 RNF113AO15541 343 aaKnown RBP21.39■■□□□ 1.01
DDR1-272ENST00000513243 POLR3DP05423 398 aaPredicted RBP21.39■■□□□ 1.01
DDR1-272ENST00000513243 SHROOM1Q2M3G4 852 aaPredicted RBP21.39■■□□□ 1.01
DDR1-272ENST00000513243 GPAT2Q6NUI2 795 aa21.39■■□□□ 1.01
DDR1-272ENST00000513243 PRRT2Q7Z6L0 340 aaPredicted RBP21.39■■□□□ 1.01
DDR1-272ENST00000513243 ANKRD23Q86SG2 305 aa21.39■■□□□ 1.01
DDR1-272ENST00000513243 PDE1AP54750 535 aa21.38■■□□□ 1.01
DDR1-272ENST00000513243 EVX2Q03828 476 aa21.38■■□□□ 1.01
DDR1-272ENST00000513243 CTU1Q7Z7A3 348 aaKnown RBP21.38■■□□□ 1.01
DDR1-272ENST00000513243 ABHD8Q96I13 439 aa21.38■■□□□ 1.01
DDR1-272ENST00000513243 ATP8A2Q9NTI2 1148 aa21.38■■□□□ 1.01
DDR1-272ENST00000513243 PHIPQ8WWQ0 1821 aa21.38■■□□□ 1.01
DDR1-272ENST00000513243 DDX60LQ5H9U9 1706 aaKnown RBP21.38■■□□□ 1.01
DDR1-272ENST00000513243 USP17L5A8MUK1 530 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 PDHXO00330 501 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 GDF11O95390 407 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 ZFYP08048 801 aaPredicted RBP21.37■■□□□ 1.01
DDR1-272ENST00000513243 ASNSP08243 561 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 SPP2Q13103 211 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 FASTKD5Q7L8L6 764 aaKnown RBP21.37■■□□□ 1.01
DDR1-272ENST00000513243 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 APPBP2Q92624 585 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 OSBP2Q969R2 916 aa21.37■■□□□ 1.01
DDR1-272ENST00000513243 CYP2D6P10635 497 aa21.36■■□□□ 1.01
DDR1-272ENST00000513243 NUCB1Q02818 461 aa21.36■■□□□ 1.01
DDR1-272ENST00000513243 GABPAQ06546 454 aa21.36■■□□□ 1.01
DDR1-272ENST00000513243 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
DDR1-272ENST00000513243 STRBPQ96SI9 672 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms