RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 TBC1D12O60347 775 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 CDC45O75419 566 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 FGAP02671 866 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 ALX1Q15699 326 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-227ENST00000513159 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-227ENST00000513159 SLC44A5Q8NCS7 719 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTPN20-227ENST00000513159 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
PTPN20-227ENST00000513159 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
PTPN20-227ENST00000513159 RAD50Q92878 1312 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 HSPA6P17066 643 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 GNAT2P19087 354 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 INPP5BP32019 993 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 SHMT1P34896 483 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
PTPN20-227ENST00000513159 EHD4Q9H223 541 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
PTPN20-227ENST00000513159 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
PTPN20-227ENST00000513159 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-227ENST00000513159 FKBP1BP68106 108 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-227ENST00000513159 DSCC1Q9BVC3 393 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-227ENST00000513159 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
PTPN20-227ENST00000513159 APPP05067 770 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 GJA5P36382 358 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 TDO2P48775 406 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 HUNKP57058 714 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 VGLL4Q14135 290 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-227ENST00000513159 ZNF341Q9BYN7 854 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPN20-227ENST00000513159 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-227ENST00000513159 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 SNCAIPQ9Y6H5 919 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
PTPN20-227ENST00000513159 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 FAM155AB1AL88 458 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-227ENST00000513159 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-227ENST00000513159 NF2P35240 595 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 CDK8P49336 464 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 PPARAQ07869 468 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-227ENST00000513159 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 WRNIP1Q96S55 665 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 NAPBQ9H115 298 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
PTPN20-227ENST00000513159 ANAPC4Q9UJX5 808 aa12.35□□□□□ -0.43
PTPN20-227ENST00000513159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPN20-227ENST00000513159 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 HLA-DOAP06340 250 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 FGRP09769 529 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 RASA1P20936 1047 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
PTPN20-227ENST00000513159 HAND2P61296 217 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-227ENST00000513159 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-227ENST00000513159 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
PTPN20-227ENST00000513159 TBC1D10CQ8IV04 446 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPN20-227ENST00000513159 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
PTPN20-227ENST00000513159 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.43
PTPN20-227ENST00000513159 PRDM1O75626 825 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 GDF11O95390 407 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 SEC24BO95487 1268 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 CAP2P40123 477 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 MFAP1P55081 439 aaKnown RBP12.33□□□□□ -0.44
PTPN20-227ENST00000513159 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 RASAL3Q86YV0 1011 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
PTPN20-227ENST00000513159 DNAJC5GQ8N7S2 189 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms