RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 HEXIM2Q96MH2 286 aaKnown RBP7.43□□□□□ -1.22
LINC01088-210ENST00000513153 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
LINC01088-210ENST00000513153 JAG2Q9Y219 1238 aa7.43□□□□□ -1.22
LINC01088-210ENST00000513153 TMEM253P0C7T8 217 aa7.42□□□□□ -1.22
LINC01088-210ENST00000513153 CYFIP1Q7L576 1253 aa7.42□□□□□ -1.22
LINC01088-210ENST00000513153 STK35Q8TDR2 534 aa7.42□□□□□ -1.22
LINC01088-210ENST00000513153 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
LINC01088-210ENST00000513153 SSU72Q9NP77 194 aaKnown RBP7.42□□□□□ -1.22
LINC01088-210ENST00000513153 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
LINC01088-210ENST00000513153 NSUN3Q9H649 340 aaKnown RBP7.41□□□□□ -1.22
LINC01088-210ENST00000513153 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
LINC01088-210ENST00000513153 SOWAHDA6NJG2 315 aa7.4□□□□□ -1.22
LINC01088-210ENST00000513153 FCGRTP55899 365 aa7.4□□□□□ -1.22
LINC01088-210ENST00000513153 KRTAP5-3Q6L8H2 238 aa7.4□□□□□ -1.22
LINC01088-210ENST00000513153 DTHD1Q6ZMT9 781 aa7.4□□□□□ -1.22
LINC01088-210ENST00000513153 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
LINC01088-210ENST00000513153 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC01088-210ENST00000513153 SPACA3Q8IXA5 215 aa7.4□□□□□ -1.22
LINC01088-210ENST00000513153 NEFMP07197 916 aa7.39□□□□□ -1.23
LINC01088-210ENST00000513153 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
LINC01088-210ENST00000513153 KCNA10Q16322 511 aa7.39□□□□□ -1.23
LINC01088-210ENST00000513153 CIAPIN1Q6FI81 312 aa7.39□□□□□ -1.23
LINC01088-210ENST00000513153 FAM214BQ7L5A3 538 aa7.39□□□□□ -1.23
LINC01088-210ENST00000513153 ISL2Q96A47 359 aa7.39□□□□□ -1.23
LINC01088-210ENST00000513153 TMEM39AQ9NV64 488 aa7.39□□□□□ -1.23
LINC01088-210ENST00000513153 DSC3Q14574 896 aa7.38□□□□□ -1.23
LINC01088-210ENST00000513153 ATG14Q6ZNE5 492 aa7.38□□□□□ -1.23
LINC01088-210ENST00000513153 BCO2Q9BYV7 579 aa7.38□□□□□ -1.23
LINC01088-210ENST00000513153 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
LINC01088-210ENST00000513153 GPN3Q9UHW5 284 aaPredicted RBP7.38□□□□□ -1.23
LINC01088-210ENST00000513153 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC01088-210ENST00000513153 HOXA5P20719 270 aa7.37□□□□□ -1.23
LINC01088-210ENST00000513153 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
LINC01088-210ENST00000513153 ZC3H12AQ5D1E8 599 aaKnown RBP7.37□□□□□ -1.23
LINC01088-210ENST00000513153 SULF2Q8IWU5 870 aa7.37□□□□□ -1.23
LINC01088-210ENST00000513153 C20orf173Q96LM9 149 aa7.37□□□□□ -1.23
LINC01088-210ENST00000513153 CD320Q9NPF0 282 aa7.37□□□□□ -1.23
LINC01088-210ENST00000513153 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 TCAF2A6NFQ2 919 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 XRCC5P13010 732 aaKnown RBP7.36□□□□□ -1.23
LINC01088-210ENST00000513153 PPP2R3AQ06190 1150 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 ZNF252P-AS1Q0IIN9 211 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 C3orf58Q8NDZ4 430 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 KCNB2Q92953 911 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 CARS2Q9HA77 564 aaKnown RBP7.36□□□□□ -1.23
LINC01088-210ENST00000513153 KCNK12Q9HB15 430 aa7.36□□□□□ -1.23
LINC01088-210ENST00000513153 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 ARNTP27540 789 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 CLCN7P51798 805 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 NXPE4Q6UWF7 544 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 RELTQ969Z4 430 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 C19orf73Q9NVV2 129 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 NLRP2Q9NX02 1062 aa7.35□□□□□ -1.23
LINC01088-210ENST00000513153 NME2P22392 152 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 NTF4P34130 210 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 GDNFP39905 211 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 ERVK-24P63145 666 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 ENOX2Q16206 610 aaKnown RBP7.34□□□□□ -1.23
LINC01088-210ENST00000513153 MPRIPQ6WCQ1 1025 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 RNF214Q8ND24 703 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 GPBAR1Q8TDU6 330 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 EPB41L4BQ9H329 900 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 DCP1AQ9NPI6 582 aaPredicted RBP7.34□□□□□ -1.23
LINC01088-210ENST00000513153 PRDM10Q9NQV6 1147 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 DCTN4Q9UJW0 460 aa7.34□□□□□ -1.23
LINC01088-210ENST00000513153 GNEQ9Y223 722 aaKnown RBP7.34□□□□□ -1.23
LINC01088-210ENST00000513153 PNMA6FA0A0J9YX94 578 aa7.33□□□□□ -1.24
LINC01088-210ENST00000513153 TREHO43280 583 aa7.33□□□□□ -1.24
LINC01088-210ENST00000513153 NUAK1O60285 661 aa7.33□□□□□ -1.24
LINC01088-210ENST00000513153 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.33□□□□□ -1.24
LINC01088-210ENST00000513153 MAP1SQ66K74 1059 aaPredicted RBP7.33□□□□□ -1.24
LINC01088-210ENST00000513153 SMG5Q9UPR3 1016 aaKnown RBP7.33□□□□□ -1.24
LINC01088-210ENST00000513153 ETV2O00321 342 aaPredicted RBP7.32□□□□□ -1.24
LINC01088-210ENST00000513153 BRD1O95696 1058 aa7.32□□□□□ -1.24
LINC01088-210ENST00000513153 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
LINC01088-210ENST00000513153 NECAB3Q96P71 396 aaPredicted RBP7.32□□□□□ -1.24
LINC01088-210ENST00000513153 PPP4R2Q9NY27 417 aa7.32□□□□□ -1.24
LINC01088-210ENST00000513153 AKAP2Q9Y2D5 859 aa7.32□□□□□ -1.24
LINC01088-210ENST00000513153 ENC1O14682 589 aa7.31□□□□□ -1.24
LINC01088-210ENST00000513153 BMP6P22004 513 aa7.31□□□□□ -1.24
LINC01088-210ENST00000513153 RING1Q06587 406 aa7.31□□□□□ -1.24
LINC01088-210ENST00000513153 UBE3DQ7Z6J8 389 aa7.31□□□□□ -1.24
LINC01088-210ENST00000513153 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
LINC01088-210ENST00000513153 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
LINC01088-210ENST00000513153 PAGE1O75459 146 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 GLDCP23378 1020 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 LINC00310P59036 64 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 RASIP1Q5U651 963 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 NPAS4Q8IUM7 802 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 GRIN3AQ8TCU5 1115 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 KCNN1Q92952 543 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 EMILIN2Q9BXX0 1053 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 ATP13A1Q9HD20 1204 aa7.3□□□□□ -1.24
LINC01088-210ENST00000513153 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
LINC01088-210ENST00000513153 PPM1JQ5JR12 505 aa7.29□□□□□ -1.24
LINC01088-210ENST00000513153 HSPA12BQ96MM6 686 aa7.29□□□□□ -1.24
LINC01088-210ENST00000513153 FOXQ1Q9C009 403 aa7.29□□□□□ -1.24
LINC01088-210ENST00000513153 IRF2BPLQ9H1B7 796 aa7.29□□□□□ -1.24
LINC01088-210ENST00000513153 PARD6AQ9NPB6 346 aa7.29□□□□□ -1.24
LINC01088-210ENST00000513153 ABHD4Q8TB40 342 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms