RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
PDPN-210ENST00000513143 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
PDPN-210ENST00000513143 SMIM22K7EJ46 135 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 CTDSPL2Q05D32 466 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 KRT32Q14532 448 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 EAPPQ56P03 285 aaPredicted RBP14.88□□□□□ -0.03
PDPN-210ENST00000513143 TBC1D10CQ8IV04 446 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 ZSCAN29Q8IWY8 852 aaPredicted RBP14.88□□□□□ -0.03
PDPN-210ENST00000513143 STAG1Q8WVM7 1258 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 DCPSQ96C86 337 aaKnown RBP14.88□□□□□ -0.03
PDPN-210ENST00000513143 TEPSINQ96N21 525 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 TMEM39BQ9GZU3 492 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 EHD4Q9H223 541 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 SCAF8Q9UPN6 1271 aaKnown RBP14.88□□□□□ -0.03
PDPN-210ENST00000513143 PPP2R3BQ9Y5P8 575 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 MYH8P13535 1937 aa14.88□□□□□ -0.03
PDPN-210ENST00000513143 E7EWF7 191 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
PDPN-210ENST00000513143 FGRP09769 529 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 PCP11498 1178 aaKnown RBP14.87□□□□□ -0.03
PDPN-210ENST00000513143 GABPAQ06546 454 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 AKNAD1Q5T1N1 836 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 STOX1Q6ZVD7 989 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 C16orf86Q6ZW13 317 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 METTL16Q86W50 562 aaKnown RBP14.87□□□□□ -0.03
PDPN-210ENST00000513143 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
PDPN-210ENST00000513143 ZNF526Q8TF50 670 aaPredicted RBP14.87□□□□□ -0.03
PDPN-210ENST00000513143 CSRNP1Q96S65 589 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
PDPN-210ENST00000513143 ADCK5Q3MIX3 580 aa14.86□□□□□ -0.03
PDPN-210ENST00000513143 MFSD6Q6ZSS7 791 aa14.86□□□□□ -0.03
PDPN-210ENST00000513143 SULF1Q8IWU6 871 aa14.86□□□□□ -0.03
PDPN-210ENST00000513143 CDAN1Q8IWY9 1227 aa14.86□□□□□ -0.03
PDPN-210ENST00000513143 DYNLL2Q96FJ2 89 aa14.86□□□□□ -0.03
PDPN-210ENST00000513143 KIF2CQ99661 725 aa14.86□□□□□ -0.03
PDPN-210ENST00000513143 RNF41Q9H4P4 317 aaPredicted RBP14.86□□□□□ -0.03
PDPN-210ENST00000513143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDPN-210ENST00000513143 TBC1D12O60347 775 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 POTEJP0CG39 1038 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 PDE4BQ07343 736 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 LDHDQ86WU2 507 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 TM6SF1Q9BZW5 370 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 CNNM2Q9H8M5 875 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 INCENPQ9NQS7 918 aa14.85□□□□□ -0.03
PDPN-210ENST00000513143 ORC4O43929 436 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 PSMA5P28066 241 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 CDK8P49336 464 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 MAP3K10Q02779 954 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 TRDNQ13061 729 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
PDPN-210ENST00000513143 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 JAKMIP1Q96N16 626 aaKnown RBP14.84□□□□□ -0.03
PDPN-210ENST00000513143 NEK1Q96PY6 1258 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 KRT23Q9C075 422 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 ZNF287Q9HBT7 754 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 SWAP70Q9UH65 585 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 HERC5Q9UII4 1024 aaKnown RBP14.84□□□□□ -0.03
PDPN-210ENST00000513143 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
PDPN-210ENST00000513143 NEDD4P46934 1319 aa14.83□□□□□ -0.03
PDPN-210ENST00000513143 NT5C2P49902 561 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 NBPF12Q5TAG4 269 aaPredicted RBP14.83□□□□□ -0.04
PDPN-210ENST00000513143 CDC37L1Q7L3B6 337 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 USP48Q86UV5 1035 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 CRACR2BQ8N4Y2 399 aaPredicted RBP14.83□□□□□ -0.04
PDPN-210ENST00000513143 SLC44A5Q8NCS7 719 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 HOOK2Q96ED9 719 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 GPBP1L1Q9HC44 474 aaPredicted RBP14.83□□□□□ -0.04
PDPN-210ENST00000513143 ZSWIM6Q9HCJ5 1215 aa14.83□□□□□ -0.04
PDPN-210ENST00000513143 B4E1Z4 1266 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 ADM5C9JUS6 153 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 PRDM1O75626 825 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 HMGB1P09429 215 aaKnown RBP14.82□□□□□ -0.04
PDPN-210ENST00000513143 SLURP2P0DP57 97 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 SHMT1P34896 483 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 COL9A3Q14050 684 aaPredicted RBP14.82□□□□□ -0.04
PDPN-210ENST00000513143 SUPT20HL1Q3ZLR7 823 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 PRAMEF18Q5VWM3 479 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 TATDN1Q6P1N9 297 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 RALYLQ86SE5 291 aaKnown RBP14.82□□□□□ -0.04
PDPN-210ENST00000513143 MB21D2Q8IYB1 491 aaPredicted RBP14.82□□□□□ -0.04
PDPN-210ENST00000513143 NKX2-3Q8TAU0 364 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 TRIM34Q9BYJ4 488 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 MKNK2Q9HBH9 465 aa14.82□□□□□ -0.04
PDPN-210ENST00000513143 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 CASTP20810 708 aaKnown RBP14.81□□□□□ -0.04
PDPN-210ENST00000513143 RASA1P20936 1047 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 RABEP1Q15276 862 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
PDPN-210ENST00000513143 MAP1SQ66K74 1059 aaPredicted RBP14.81□□□□□ -0.04
PDPN-210ENST00000513143 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 MIGA2Q7L4E1 593 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms