RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
CHD1-210ENST00000513064 GREM1O60565 184 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 FAM160A1Q05DH4 1040 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 SNAP47Q5SQN1 464 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.68□□□□□ -1.18
CHD1-210ENST00000513064 SHISA5Q8N114 240 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 FBXL6Q8N531 539 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 KCT2Q8NC54 265 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 ZNF507Q8TCN5 953 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 TBC1D32Q96NH3 1257 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 LGR6Q9HBX8 967 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 SSU72Q9NP77 194 aaKnown RBP7.68□□□□□ -1.18
CHD1-210ENST00000513064 RNF112Q9ULX5 631 aa7.68□□□□□ -1.18
CHD1-210ENST00000513064 PRAMEF27A3QJZ7 478 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 WDR64B1ANS9 1081 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 FAM196AQ6ZSG2 479 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 CDC37L1Q7L3B6 337 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 METTL16Q86W50 562 aaKnown RBP7.67□□□□□ -1.18
CHD1-210ENST00000513064 GIMAP7Q8NHV1 300 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 ZNF296Q8WUU4 475 aaPredicted RBP7.67□□□□□ -1.18
CHD1-210ENST00000513064 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 ADAMTS1Q9UHI8 967 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 ROBO2Q9HCK4 1378 aa7.67□□□□□ -1.18
CHD1-210ENST00000513064 PRR19A6NJB7 356 aa7.66□□□□□ -1.18
CHD1-210ENST00000513064 BPNT1O95861 308 aa7.66□□□□□ -1.18
CHD1-210ENST00000513064 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.18
CHD1-210ENST00000513064 OGFOD3Q6PK18 319 aa7.66□□□□□ -1.18
CHD1-210ENST00000513064 UBE3DQ7Z6J8 389 aa7.66□□□□□ -1.18
CHD1-210ENST00000513064 METTL22Q9BUU2 404 aaPredicted RBP7.66□□□□□ -1.18
CHD1-210ENST00000513064 SUPT16HQ9Y5B9 1047 aaKnown RBP7.66□□□□□ -1.18
CHD1-210ENST00000513064 FAM170BA6NMN3 283 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 GRK4P32298 578 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 CAP2P40123 477 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 ETF1P62495 437 aaKnown RBP7.65□□□□□ -1.18
CHD1-210ENST00000513064 CYP27A1Q02318 531 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 CDK5R2Q13319 367 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 MPP2Q14168 576 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 USP48Q86UV5 1035 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 HID1Q8IV36 788 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 LRRC3Q9BY71 257 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 FBRSQ9HAH7 460 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 ATG3Q9NT62 314 aa7.65□□□□□ -1.18
CHD1-210ENST00000513064 PRR36Q9H6K5 1346 aa7.64□□□□□ -1.19
CHD1-210ENST00000513064 TGFB1P01137 390 aa7.64□□□□□ -1.19
CHD1-210ENST00000513064 SLBPQ14493 270 aaKnown RBP eCLIP7.64□□□□□ -1.19
CHD1-210ENST00000513064 FBXO27Q8NI29 283 aa7.64□□□□□ -1.19
CHD1-210ENST00000513064 OSBPL1AQ9BXW6 950 aa7.64□□□□□ -1.19
CHD1-210ENST00000513064 DDX41Q9UJV9 622 aaKnown RBP7.64□□□□□ -1.19
CHD1-210ENST00000513064 LRIG2O94898 1065 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 HDLBPQ00341 1268 aaKnown RBP7.63□□□□□ -1.19
CHD1-210ENST00000513064 PDE4BQ07343 736 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 NKG7Q16617 165 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 ZNF394Q53GI3 561 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 ZMYM1Q5SVZ6 1142 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 DUSP27Q5VZP5 1158 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 ZNF765Q7L2R6 523 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 ARMCX6Q7L4S7 300 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 REC114Q7Z4M0 266 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 DUSP23Q9BVJ7 150 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 PIM2Q9P1W9 311 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 ADAM30Q9UKF2 790 aa7.63□□□□□ -1.19
CHD1-210ENST00000513064 PGRP06401 933 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 FAM87AP0C7U9 286 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 CRKP46108 304 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 RBM25P49756 843 aaKnown RBP7.62□□□□□ -1.19
CHD1-210ENST00000513064 RACK1P63244 317 aaKnown RBP7.62□□□□□ -1.19
CHD1-210ENST00000513064 CWF19L2Q2TBE0 894 aaKnown RBP7.62□□□□□ -1.19
CHD1-210ENST00000513064 CYP27C1Q4G0S4 372 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 NT5DC4Q86YG4 428 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
CHD1-210ENST00000513064 SPON2Q9BUD6 331 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 NT5C1AQ9BXI3 368 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 PRDM10Q9NQV6 1147 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 LEMD3Q9Y2U8 911 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 POLR3KQ9Y2Y1 108 aaPredicted RBP7.62□□□□□ -1.19
CHD1-210ENST00000513064 PCDHGB7Q9Y5F8 929 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 CORINQ9Y5Q5 1042 aa7.62□□□□□ -1.19
CHD1-210ENST00000513064 FOSL1P15407 271 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 TMEM201Q5SNT2 666 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
CHD1-210ENST00000513064 KIAA0825Q8IV33 1275 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 MCATQ8IVS2 390 aaKnown RBP7.61□□□□□ -1.19
CHD1-210ENST00000513064 ZNF654Q8IZM8 581 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
CHD1-210ENST00000513064 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 UBP1Q9NZI7 540 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 TJP2Q9UDY2 1190 aa7.61□□□□□ -1.19
CHD1-210ENST00000513064 TLR3O15455 904 aaKnown RBP7.6□□□□□ -1.19
CHD1-210ENST00000513064 COBLO75128 1261 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 LEFTY1O75610 366 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 CST3P01034 146 aaPredicted RBP7.6□□□□□ -1.19
CHD1-210ENST00000513064 PLCG1P19174 1290 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 CD97P48960 835 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 APOBRQ0VD83 1088 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 C9orf131Q5VYM1 1079 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 SLC6A19Q695T7 634 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 FAM214BQ7L5A3 538 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 TOP6BLQ8N6T0 577 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 MFSD2AQ8NA29 543 aa7.6□□□□□ -1.19
CHD1-210ENST00000513064 ACSF2Q96CM8 615 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms