RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 LRP2BPQ9P2M1 347 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 COLQQ9Y215 455 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-216ENST00000512683 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.06
VEGFA-216ENST00000512683 TRIM75PA6NK02 468 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 USP17L5A8MUK1 530 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 TNPO2O14787 897 aaKnown RBP15.45■□□□□ 0.06
VEGFA-216ENST00000512683 FXR1P51114 621 aaKnown RBP eCLIP15.45■□□□□ 0.06
VEGFA-216ENST00000512683 SH3D19Q5HYK7 790 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 CCDC158Q5M9N0 1113 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 ZNF384Q8TF68 577 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 U2AF1L4Q8WU68 220 aaKnown RBP15.45■□□□□ 0.06
VEGFA-216ENST00000512683 SHISA4Q96DD7 197 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 RAI14Q9P0K7 980 aa15.45■□□□□ 0.06
VEGFA-216ENST00000512683 SPP2Q13103 211 aa15.44■□□□□ 0.06
VEGFA-216ENST00000512683 METTL16Q86W50 562 aaKnown RBP15.44■□□□□ 0.06
VEGFA-216ENST00000512683 CERS3Q8IU89 383 aa15.44■□□□□ 0.06
VEGFA-216ENST00000512683 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-216ENST00000512683 WDR18Q9BV38 432 aa15.44■□□□□ 0.06
VEGFA-216ENST00000512683 GABRQQ9UN88 632 aa15.44■□□□□ 0.06
VEGFA-216ENST00000512683 RBBP6Q7Z6E9 1792 aaKnown RBP15.44■□□□□ 0.06
VEGFA-216ENST00000512683 MKI67P46013 3256 aaKnown RBP15.43■□□□□ 0.06
VEGFA-216ENST00000512683 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
VEGFA-216ENST00000512683 TEX11Q8IYF3 940 aa15.43■□□□□ 0.06
VEGFA-216ENST00000512683 PNMA6EA0A0J9YXQ4 647 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 C19orf81C9J6K1 198 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 ASNSP08243 561 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 HOXA7P31268 230 aaPredicted RBP15.42■□□□□ 0.06
VEGFA-216ENST00000512683 MCAMP43121 646 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 POLA2Q14181 598 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 NAA16Q6N069 864 aaPredicted RBP15.42■□□□□ 0.06
VEGFA-216ENST00000512683 TBC1D9Q6ZT07 1266 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 SSH3Q8TE77 659 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 CENPFP49454 3210 aa15.42■□□□□ 0.06
VEGFA-216ENST00000512683 FARP2O94887 1054 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-216ENST00000512683 TFRCP02786 760 aaKnown RBP15.41■□□□□ 0.06
VEGFA-216ENST00000512683 BACE1P56817 501 aa15.41■□□□□ 0.06
VEGFA-216ENST00000512683 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
VEGFA-216ENST00000512683 CRISPLD2Q9H0B8 497 aa15.41■□□□□ 0.06
VEGFA-216ENST00000512683 UNC93B1Q9H1C4 597 aa15.41■□□□□ 0.06
VEGFA-216ENST00000512683 PAK6Q9NQU5 681 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-216ENST00000512683 MORF4L1Q9UBU8 362 aa15.41■□□□□ 0.06
VEGFA-216ENST00000512683 NOP58Q9Y2X3 529 aaKnown RBP15.41■□□□□ 0.06
VEGFA-216ENST00000512683 MYH2Q9UKX2 1941 aa15.41■□□□□ 0.06
VEGFA-216ENST00000512683 A0A1W2PPC1 479 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-216ENST00000512683 INHAP05111 366 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 TNNI3KQ59H18 835 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 TREML2Q5T2D2 321 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 TMEM57Q8N5G2 664 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 ANKLE1Q8NAG6 615 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 GTF3C2Q8WUA4 911 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-216ENST00000512683 TMOD4Q9NZQ9 345 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 GJD2Q9UKL4 321 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-216ENST00000512683 FPGT-TNNI3KV9GXZ4 949 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 BRCA2P51587 3418 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
VEGFA-216ENST00000512683 HMGCS2P54868 508 aa15.39■□□□□ 0.05
VEGFA-216ENST00000512683 TRMT44Q8IYL2 757 aaKnown RBP15.39■□□□□ 0.05
VEGFA-216ENST00000512683 ASCC2Q9H1I8 757 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-216ENST00000512683 CEP290O15078 2479 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 ZBTB7BO15156 539 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-216ENST00000512683 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
VEGFA-216ENST00000512683 SLURP2P0DP57 97 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 XRCC5P13010 732 aaKnown RBP15.38■□□□□ 0.05
VEGFA-216ENST00000512683 ELNP15502 786 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 OS9Q13438 667 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-216ENST00000512683 PI16Q6UXB8 463 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-216ENST00000512683 DEFB118Q96PH6 123 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 TRIM34Q9BYJ4 488 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 PRO3102Q9H379 93 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
VEGFA-216ENST00000512683 USP17L10C9JJH3 530 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 EVI5O60447 810 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 HMGCRP04035 888 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 CYP2E1P05181 493 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-216ENST00000512683 HLA-DOAP06340 250 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 IRX3P78415 501 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-216ENST00000512683 NECAB2Q7Z6G3 386 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 TGFBRAP1Q8WUH2 860 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 DBNDD2Q9BQY9 259 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.05
VEGFA-216ENST00000512683 RPTORQ8N122 1335 aa15.37■□□□□ 0.05
VEGFA-216ENST00000512683 RLBP1P12271 317 aa15.36■□□□□ 0.05
VEGFA-216ENST00000512683 RRP1BQ14684 758 aaKnown RBP15.36■□□□□ 0.05
VEGFA-216ENST00000512683 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
VEGFA-216ENST00000512683 CRACR2BQ8N4Y2 399 aaPredicted RBP15.36■□□□□ 0.05
VEGFA-216ENST00000512683 GPRC5AQ8NFJ5 357 aa15.36■□□□□ 0.05
VEGFA-216ENST00000512683 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.052e-8■■■■■ 27.9
VEGFA-216ENST00000512683 HMX1Q9NP08 348 aaPredicted RBP15.36■□□□□ 0.05
VEGFA-216ENST00000512683 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
VEGFA-216ENST00000512683 FAM196BA6NMK8 535 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 MAPK4P31152 587 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 SOCS4Q8WXH5 440 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 P2RX7Q99572 595 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms