RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 EYA2O00167 538 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
MSH3-203ENST00000512531 PCCAP05165 728 aaPredicted RBP11.25□□□□□ -0.61
MSH3-203ENST00000512531 SLC10A3P09131 477 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
MSH3-203ENST00000512531 NDUFV2P19404 249 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 MRE11P49959 708 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 ZNF157P51786 506 aaPredicted RBP11.25□□□□□ -0.61
MSH3-203ENST00000512531 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
MSH3-203ENST00000512531 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 KAZALD1Q96I82 304 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 ZIC5Q96T25 663 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 BOLA2Q9H3K6 86 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 DDX49Q9Y6V7 483 aaKnown RBP11.25□□□□□ -0.61
MSH3-203ENST00000512531 PITPNM2Q9BZ72 1349 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 PDE4DIPQ5VU43 2346 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 CD2BP2O95400 341 aaKnown RBP11.24□□□□□ -0.61
MSH3-203ENST00000512531 EGFRP00533 1210 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 PDCP20941 246 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 TFCP2Q12800 502 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
MSH3-203ENST00000512531 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 HAUS7Q99871 368 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 PDRG1Q9NUG6 133 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 SMC3Q9UQE7 1217 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 KIF3AQ9Y496 699 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 SNX14Q9Y5W7 946 aa11.24□□□□□ -0.61
MSH3-203ENST00000512531 SPEF2Q9C093 1822 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 PDE8AO60658 829 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 ZFYP08048 801 aaPredicted RBP11.23□□□□□ -0.61
MSH3-203ENST00000512531 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
MSH3-203ENST00000512531 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
MSH3-203ENST00000512531 CASP7P55210 303 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 CCDC152Q4G0S7 254 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
MSH3-203ENST00000512531 ZSCAN25Q6NSZ9 544 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 NEUROD6Q96NK8 337 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 GMLQ99445 158 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 HELLSQ9NRZ9 838 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 RNF186Q9NXI6 227 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 AKAP11Q9UKA4 1901 aa11.23□□□□□ -0.61
MSH3-203ENST00000512531 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 LILRB3O75022 631 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 UFL1O94874 794 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 ATP2B4P23634 1241 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 XDHP47989 1333 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 FOXO4P98177 505 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 NMIQ13287 307 aaPredicted RBP11.22□□□□□ -0.61
MSH3-203ENST00000512531 PKN2Q16513 984 aaKnown RBP11.22□□□□□ -0.61
MSH3-203ENST00000512531 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 TTC39AQ5SRH9 613 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 MCTP1Q6DN14 999 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 RUFY3Q7L099 469 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 MAP4K1Q92918 833 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 KCNB2Q92953 911 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 CDCA5Q96FF9 252 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 JAKMIP1Q96N16 626 aaKnown RBP11.22□□□□□ -0.61
MSH3-203ENST00000512531 CSRNP1Q96S65 589 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 DNAJC2Q99543 621 aaKnown RBP11.22□□□□□ -0.61
MSH3-203ENST00000512531 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSH3-203ENST00000512531 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
MSH3-203ENST00000512531 KCNQ5Q9NR82 932 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
MSH3-203ENST00000512531 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
MSH3-203ENST00000512531 SCN9AQ15858 1988 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 PSME4Q14997 1843 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 TRPA1O75762 1119 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 CYP2E1P05181 493 aaPredicted RBP11.21□□□□□ -0.61
MSH3-203ENST00000512531 IFIT1P09914 478 aaKnown RBP11.21□□□□□ -0.61
MSH3-203ENST00000512531 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.61
MSH3-203ENST00000512531 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 CTU1Q7Z7A3 348 aaKnown RBP11.21□□□□□ -0.61
MSH3-203ENST00000512531 KBTBD3Q8NAB2 608 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 CTNNA3Q9UI47 895 aa11.21□□□□□ -0.61
MSH3-203ENST00000512531 PAPPA2Q9BXP8 1791 aa11.21□□□□□ -0.62
MSH3-203ENST00000512531 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 GPR37L1O60883 481 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 FGD1P98174 961 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 IRF5Q13568 498 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 SCARF1Q14162 830 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 TSGA10IPQ3SY00 556 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms