RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 UVSSAQ2YD98 709 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 KRT27Q7Z3Y8 459 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 CCDC74AQ96AQ1 378 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 RUSC1Q9BVN2 902 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 RNF208Q9H0X6 261 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 KIAA1107Q9UPP5 1409 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 DLGAP3O95886 979 aa8.85□□□□□ -0.99
GYPB-212ENST00000511198 FSTP19883 344 aa8.85□□□□□ -0.99
GYPB-212ENST00000511198 TMC7Q7Z402 723 aa8.85□□□□□ -0.99
GYPB-212ENST00000511198 NRSN2Q9GZP1 204 aa8.85□□□□□ -0.99
GYPB-212ENST00000511198 CLEC4MQ9H2X3 399 aaPredicted RBP8.85□□□□□ -0.99
GYPB-212ENST00000511198 RAXQ9Y2V3 346 aa8.85□□□□□ -0.99
GYPB-212ENST00000511198 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 PCDH1Q08174 1060 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 ANKRD34AQ69YU3 496 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 CAMKK2Q96RR4 588 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 TMPRSS13Q9BYE2 586 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 EHD4Q9H223 541 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 BIN2Q9UBW5 565 aaPredicted RBP8.84□□□□□ -0.99
GYPB-212ENST00000511198 DCTN4Q9UJW0 460 aa8.84□□□□□ -0.99
GYPB-212ENST00000511198 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
GYPB-212ENST00000511198 DHX15O43143 795 aaKnown RBP8.83□□□□□ -1
GYPB-212ENST00000511198 PREPP48147 710 aa8.83□□□□□ -1
GYPB-212ENST00000511198 GSTM4Q03013 218 aa8.83□□□□□ -1
GYPB-212ENST00000511198 UTP4Q969X6 686 aaKnown RBP8.83□□□□□ -1
GYPB-212ENST00000511198 MYRFLQ96LU7 910 aa8.83□□□□□ -1
GYPB-212ENST00000511198 PIK3C2BO00750 1634 aa8.83□□□□□ -1
GYPB-212ENST00000511198 MST1RQ04912 1400 aa8.82□□□□□ -1
GYPB-212ENST00000511198 ITPKAP23677 461 aa8.82□□□□□ -1
GYPB-212ENST00000511198 ARTNQ5T4W7 220 aa8.82□□□□□ -1
GYPB-212ENST00000511198 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.82□□□□□ -1
GYPB-212ENST00000511198 SLC51AQ86UW1 340 aa8.82□□□□□ -1
GYPB-212ENST00000511198 USP26Q9BXU7 913 aa8.82□□□□□ -1
GYPB-212ENST00000511198 STOML1Q9UBI4 398 aa8.82□□□□□ -1
GYPB-212ENST00000511198 DISP2A7MBM2 1401 aa8.81□□□□□ -1
GYPB-212ENST00000511198 DSC3Q14574 896 aa8.81□□□□□ -1
GYPB-212ENST00000511198 UNC5CLQ8IV45 518 aa8.81□□□□□ -1
GYPB-212ENST00000511198 FAM20CQ8IXL6 584 aa8.81□□□□□ -1
GYPB-212ENST00000511198 DNAJC5GQ8N7S2 189 aa8.81□□□□□ -1
GYPB-212ENST00000511198 GLIS3Q8NEA6 775 aa8.81□□□□□ -1
GYPB-212ENST00000511198 ZNF576Q9H609 170 aa8.81□□□□□ -1
GYPB-212ENST00000511198 ABCB6Q9NP58 842 aa8.81□□□□□ -1
GYPB-212ENST00000511198 RNF112Q9ULX5 631 aa8.81□□□□□ -1
GYPB-212ENST00000511198 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
GYPB-212ENST00000511198 SHANK3Q9BYB0 1731 aa8.8□□□□□ -1
GYPB-212ENST00000511198 PRPF40BQ6NWY9 871 aaKnown RBP8.8□□□□□ -1
GYPB-212ENST00000511198 FDX2Q6P4F2 183 aa8.8□□□□□ -1
GYPB-212ENST00000511198 SMG8Q8ND04 991 aaKnown RBP8.8□□□□□ -1
GYPB-212ENST00000511198 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
GYPB-212ENST00000511198 SUGCTQ9HAC7 445 aa8.8□□□□□ -1
GYPB-212ENST00000511198 IVNS1ABPQ9Y6Y0 642 aa8.8□□□□□ -1
GYPB-212ENST00000511198 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.8□□□□□ -1
GYPB-212ENST00000511198 SCO2A0A1W2PP80 73 aa8.79□□□□□ -1
GYPB-212ENST00000511198 SART1O43290 800 aaKnown RBP8.79□□□□□ -1
GYPB-212ENST00000511198 TIAF1O95411 115 aa8.79□□□□□ -1
GYPB-212ENST00000511198 B3GALT4O96024 378 aa8.79□□□□□ -1
GYPB-212ENST00000511198 IGLV1-40P01703 118 aa8.79□□□□□ -1
GYPB-212ENST00000511198 CTSBP07858 339 aa8.79□□□□□ -1
GYPB-212ENST00000511198 PTPN12Q05209 780 aaKnown RBP8.79□□□□□ -1
GYPB-212ENST00000511198 KCNA1Q09470 495 aa8.79□□□□□ -1
GYPB-212ENST00000511198 GRM2Q14416 872 aa8.79□□□□□ -1
GYPB-212ENST00000511198 EXOSC6Q5RKV6 272 aaKnown RBP8.79□□□□□ -1
GYPB-212ENST00000511198 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
GYPB-212ENST00000511198 TRIM42Q8IWZ5 723 aa8.79□□□□□ -1
GYPB-212ENST00000511198 TRIM56Q9BRZ2 755 aaKnown RBP8.79□□□□□ -1
GYPB-212ENST00000511198 C7orf69Q9H7B7 122 aa8.79□□□□□ -1
GYPB-212ENST00000511198 ZNF644Q9H582 1327 aaPredicted RBP8.79□□□□□ -1
GYPB-212ENST00000511198 MYOM2P54296 1465 aa8.78□□□□□ -1
GYPB-212ENST00000511198 PLEKHH2Q8IVE3 1493 aa8.78□□□□□ -1
GYPB-212ENST00000511198 TNS1Q9HBL0 1735 aaKnown RBP8.78□□□□□ -1
GYPB-212ENST00000511198 MARF1Q9Y4F3 1742 aaKnown RBP8.78□□□□□ -1
GYPB-212ENST00000511198 HMX2A2RU54 273 aa8.78□□□□□ -1
GYPB-212ENST00000511198 TREHO43280 583 aa8.78□□□□□ -1
GYPB-212ENST00000511198 EIF4EBP3O60516 100 aaPredicted RBP8.78□□□□□ -1
GYPB-212ENST00000511198 GADD45BO75293 160 aaPredicted RBP8.78□□□□□ -1
GYPB-212ENST00000511198 BMP3P12645 472 aa8.78□□□□□ -1
GYPB-212ENST00000511198 MAPK1P28482 360 aa8.78□□□□□ -1
GYPB-212ENST00000511198 LRP8Q14114 963 aa8.78□□□□□ -1
GYPB-212ENST00000511198 SYT17Q9BSW7 474 aa8.78□□□□□ -1
GYPB-212ENST00000511198 TRAIPQ9BWF2 469 aa8.78□□□□□ -1
GYPB-212ENST00000511198 ZFP64Q9NPA5 681 aa8.78□□□□□ -1
GYPB-212ENST00000511198 MBD5Q9P267 1494 aa8.77□□□□□ -1
GYPB-212ENST00000511198 COL22A1Q8NFW1 1626 aaPredicted RBP8.77□□□□□ -1.01
GYPB-212ENST00000511198 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1.01
GYPB-212ENST00000511198 SLIT2O94813 1529 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 EFCAB6Q5THR3 1501 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 FAM83GA6ND36 823 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 HYAL3O43820 417 aaPredicted RBP8.77□□□□□ -1.01
GYPB-212ENST00000511198 PI16Q6UXB8 463 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 CLEC10AQ8IUN9 316 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 C12orf50Q8NA57 414 aaPredicted RBP8.77□□□□□ -1.01
GYPB-212ENST00000511198 FAM83CQ9BQN1 747 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 CYP4F12Q9HCS2 524 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 HIF3AQ9Y2N7 669 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 NRKQ7Z2Y5 1582 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 PCNTO95613 3336 aa8.77□□□□□ -1.01
GYPB-212ENST00000511198 GSC2O15499 205 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms