RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 PPP4CP60510 307 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
SMAD1-209ENST00000511125 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
SMAD1-209ENST00000511125 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 AMOTL1Q8IY63 956 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 AGBL3Q8NEM8 1001 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 CSRNP1Q96S65 589 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 TRIM34Q9BYJ4 488 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 ATP8A2Q9NTI2 1148 aa9.53□□□□□ -0.88
SMAD1-209ENST00000511125 DLEC1Q9Y238 1755 aa9.52□□□□□ -0.88
SMAD1-209ENST00000511125 IFIT3O14879 490 aaKnown RBP9.52□□□□□ -0.89
SMAD1-209ENST00000511125 GRIN3BO60391 1043 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 LMOD1P29536 600 aaPredicted RBP9.52□□□□□ -0.89
SMAD1-209ENST00000511125 TFAP4Q01664 338 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 GGA3Q9NZ52 723 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 BRCA1P38398 1863 aaKnown RBP9.52□□□□□ -0.89
SMAD1-209ENST00000511125 PLCG2P16885 1265 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 PSMA5P28066 241 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 ANTXR2P58335 489 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 RASA3Q14644 834 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 FAM163AQ96GL9 167 aaPredicted RBP9.52□□□□□ -0.89
SMAD1-209ENST00000511125 OSBPL5Q9H0X9 879 aaPredicted RBP9.52□□□□□ -0.89
SMAD1-209ENST00000511125 GPRC5DQ9NZD1 345 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 STX8Q9UNK0 236 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 MYH7P12883 1935 aa9.52□□□□□ -0.89
SMAD1-209ENST00000511125 ZNF444Q8N0Y2 327 aaPredicted RBP9.51□□□□□ -0.89
SMAD1-209ENST00000511125 GPC2Q8N158 579 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 TPCN1Q9ULQ1 816 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 LTBP3Q9NS15 1303 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 CDK8P49336 464 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 TMEM67Q5HYA8 995 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
SMAD1-209ENST00000511125 MICU3Q86XE3 530 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 SUGT1Q9Y2Z0 365 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 DCAF8L1A6NGE4 600 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 BECN1Q14457 450 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 RAB3GAP1Q15042 981 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 DDX11Q96FC9 970 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 TMX3Q96JJ7 454 aa9.51□□□□□ -0.89
SMAD1-209ENST00000511125 MKRN1Q9UHC7 482 aaKnown RBP9.51□□□□□ -0.89
SMAD1-209ENST00000511125 MYO3BQ8WXR4 1341 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 hCG_1642624A0A1W2PR95 340 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 ADM5C9JUS6 153 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 TSPY3P0CV98 308 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 TSPY8P0CW00 308 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 MCM5P33992 734 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 TOB2Q14106 344 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-209ENST00000511125 ZYXQ15942 572 aaKnown RBP9.5□□□□□ -0.89
SMAD1-209ENST00000511125 NBPF12Q5TAG4 269 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-209ENST00000511125 UBAC1Q9BSL1 405 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 KLF18A0A0U1RQI7 1052 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 ANAPC15P60006 121 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 PDE4BQ07343 736 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 KRT32Q14532 448 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 ME3Q16798 604 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 DEFB129Q9H1M3 183 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 VPS33BQ9H267 617 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-209ENST00000511125 K7ELQ4 463 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-209ENST00000511125 HLA-DOAP06340 250 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 AKR1B1P15121 316 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 ALX1Q15699 326 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-209ENST00000511125 NMRK2Q9NPI5 230 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 SERPINB13Q9UIV8 391 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
SMAD1-209ENST00000511125 EIF5BO60841 1220 aaKnown RBP9.49□□□□□ -0.89
SMAD1-209ENST00000511125 SLC3A2P08195 630 aaKnown RBP9.49□□□□□ -0.89
SMAD1-209ENST00000511125 MOB2Q70IA6 237 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 MB21D2Q8IYB1 491 aaPredicted RBP9.49□□□□□ -0.89
SMAD1-209ENST00000511125 CPVLQ9H3G5 476 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMAD1-209ENST00000511125 JAG1P78504 1218 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 RRP1BQ14684 758 aaKnown RBP9.49□□□□□ -0.89
SMAD1-209ENST00000511125 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 TTC6Q86TZ1 520 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 ESR2Q92731 530 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 TTC14Q96N46 770 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 DNAJC18Q9H819 358 aa9.49□□□□□ -0.89
SMAD1-209ENST00000511125 DOCK2Q92608 1830 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 UBE2Q2LH0YL09 131 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 EPHX2P34913 555 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 FKBP1AP62942 108 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 LRRC47Q8N1G4 583 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 TNKSO95271 1327 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 ERICH2A1L162 156 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 GLTPD2A6NH11 291 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 GOLGA8BA8MQT2 603 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms