RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
DDX41-212ENST00000511040 NOL9Q5SY16 702 aaKnown RBP16.88■□□□□ 0.29
DDX41-212ENST00000511040 SCYL3Q8IZE3 742 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 SDR42E1Q8WUS8 393 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 MS4A4AQ96JQ5 239 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 PTPN18Q99952 460 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 CRNKL1Q9BZJ0 848 aaKnown RBP16.88■□□□□ 0.29
DDX41-212ENST00000511040 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
DDX41-212ENST00000511040 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 SIPA1L1O43166 1804 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 CCL15-CCL14A0A0B4J2E2 113 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 GTF2A2P52657 109 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 NUCB1Q02818 461 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 PPIL2Q13356 520 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 UBE3CQ15386 1083 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 CCL15Q16663 113 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 ZSCAN25Q6NSZ9 544 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 CCDC84Q86UT8 332 aaPredicted RBP16.87■□□□□ 0.29
DDX41-212ENST00000511040 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 CRACR2BQ8N4Y2 399 aaPredicted RBP16.87■□□□□ 0.29
DDX41-212ENST00000511040 R3HDMLQ9H3Y0 253 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 MYH1P12882 1939 aa16.87■□□□□ 0.29
DDX41-212ENST00000511040 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
DDX41-212ENST00000511040 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 PDE1AP54750 535 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 INHBEP58166 350 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 PPATQ06203 517 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 PUS7LQ9H0K6 701 aaKnown RBP16.86■□□□□ 0.29
DDX41-212ENST00000511040 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 STAP2Q9UGK3 403 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
DDX41-212ENST00000511040 ZHX2Q9Y6X8 837 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
DDX41-212ENST00000511040 DOCK1Q14185 1865 aa16.85■□□□□ 0.29
DDX41-212ENST00000511040 TESPA1A2RU30 521 aaPredicted RBP16.85■□□□□ 0.29
DDX41-212ENST00000511040 RNF113AO15541 343 aaKnown RBP16.85■□□□□ 0.29
DDX41-212ENST00000511040 CYP2D6P10635 497 aa16.85■□□□□ 0.29
DDX41-212ENST00000511040 PTPRAP18433 802 aa16.85■□□□□ 0.29
DDX41-212ENST00000511040 EVX2Q03828 476 aa16.85■□□□□ 0.29
DDX41-212ENST00000511040 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
DDX41-212ENST00000511040 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
DDX41-212ENST00000511040 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
DDX41-212ENST00000511040 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
DDX41-212ENST00000511040 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
DDX41-212ENST00000511040 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
DDX41-212ENST00000511040 CETPP11597 493 aa16.84■□□□□ 0.29
DDX41-212ENST00000511040 PLCD1P51178 756 aa16.84■□□□□ 0.29
DDX41-212ENST00000511040 OSBP2Q969R2 916 aa16.84■□□□□ 0.29
DDX41-212ENST00000511040 DCP1AQ9NPI6 582 aaPredicted RBP16.84■□□□□ 0.29
DDX41-212ENST00000511040 MCM9Q9NXL9 1143 aa16.84■□□□□ 0.29
DDX41-212ENST00000511040 LAMB1P07942 1786 aa16.84■□□□□ 0.29
DDX41-212ENST00000511040 M0R2C6 588 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 GDF11O95390 407 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 ALDH1A1P00352 501 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 CAP2P40123 477 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 JAG1P78504 1218 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 OTUD7BQ6GQQ9 843 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 TNS4Q8IZW8 715 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 APPBP2Q92624 585 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 SLC4A4Q9Y6R1 1079 aa16.83■□□□□ 0.28
DDX41-212ENST00000511040 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 BTBD19C9JJ37 291 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 ZFYP08048 801 aaPredicted RBP16.82■□□□□ 0.28
DDX41-212ENST00000511040 CRHR2Q13324 411 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 METTL16Q86W50 562 aaKnown RBP16.82■□□□□ 0.28
DDX41-212ENST00000511040 PLEKHM2Q8IWE5 1019 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 SERPINB13Q9UIV8 391 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 KCNH4Q9UQ05 1017 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 AFG3L2Q9Y4W6 797 aa16.82■□□□□ 0.28
DDX41-212ENST00000511040 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
DDX41-212ENST00000511040 CYP2D7A0A087X1C5 515 aa16.81■□□□□ 0.28
DDX41-212ENST00000511040 SMIM22K7EJ46 135 aa16.81■□□□□ 0.28
DDX41-212ENST00000511040 STRBPQ96SI9 672 aaKnown RBP16.81■□□□□ 0.28
DDX41-212ENST00000511040 SEC62Q99442 399 aaKnown RBP16.81■□□□□ 0.28
DDX41-212ENST00000511040 ATAD5Q96QE3 1844 aa16.81■□□□□ 0.28
DDX41-212ENST00000511040 BAZ2AQ9UIF9 1905 aaKnown RBP16.8■□□□□ 0.28
DDX41-212ENST00000511040 GPR25O00155 361 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 CXCL11O14625 94 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 MOGSQ13724 837 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
DDX41-212ENST00000511040 LRRFIP1Q32MZ4 808 aaKnown RBP16.8■□□□□ 0.28
DDX41-212ENST00000511040 ZNF296Q8WUU4 475 aaPredicted RBP16.8■□□□□ 0.28
DDX41-212ENST00000511040 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 DYNLL2Q96FJ2 89 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 EHD4Q9H223 541 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 PHIPQ8WWQ0 1821 aa16.8■□□□□ 0.28
DDX41-212ENST00000511040 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 GPAA1O43292 621 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 SPP2Q13103 211 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 GADL1Q6ZQY3 521 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 SLC44A5Q8NCS7 719 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 CFHR5Q9BXR6 569 aa16.79■□□□□ 0.28
DDX41-212ENST00000511040 ZBTB21Q9ULJ3 1066 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms