RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 KLRG2A4D1S0 409 aaPredicted RBP11.58□□□□□ -0.56
RETREG1-206ENST00000510362 NPR1P16066 1061 aa11.58□□□□□ -0.56
RETREG1-206ENST00000510362 SCNN1AP37088 669 aa11.58□□□□□ -0.56
RETREG1-206ENST00000510362 POU4F2Q12837 409 aa11.58□□□□□ -0.56
RETREG1-206ENST00000510362 TWISTNBQ3B726 338 aaPredicted RBP11.58□□□□□ -0.56
RETREG1-206ENST00000510362 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
RETREG1-206ENST00000510362 STAG2Q8N3U4 1231 aa11.58□□□□□ -0.56
RETREG1-206ENST00000510362 C1orf216Q8TAB5 229 aa11.58□□□□□ -0.56
RETREG1-206ENST00000510362 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
RETREG1-206ENST00000510362 NIFKQ9BYG3 293 aaKnown RBP11.58□□□□□ -0.56
RETREG1-206ENST00000510362 GMPR2Q9P2T1 348 aaKnown RBP11.58□□□□□ -0.56
RETREG1-206ENST00000510362 SBF1O95248 1867 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 LAMB2P55268 1798 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 NTSR2O95665 410 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
RETREG1-206ENST00000510362 TCIRG1Q13488 830 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 TEAD4Q15561 434 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 DIEXFQ68CQ4 756 aaKnown RBP11.57□□□□□ -0.56
RETREG1-206ENST00000510362 TAS1R3Q7RTX0 852 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
RETREG1-206ENST00000510362 FER1L6Q2WGJ9 1857 aa11.57□□□□□ -0.56
RETREG1-206ENST00000510362 SLX4Q8IY92 1834 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 NOS2P35228 1153 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 PHKA2P46019 1235 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 CRY2Q49AN0 593 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 MKNK1Q9BUB5 465 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 PHAXQ9H814 394 aaKnown RBP11.56□□□□□ -0.56
RETREG1-206ENST00000510362 SENP2Q9HC62 589 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 CHMP3Q9Y3E7 222 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 ZNF521Q96K83 1311 aa11.56□□□□□ -0.56
RETREG1-206ENST00000510362 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
RETREG1-206ENST00000510362 SERTM1A2A2V5 107 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 SOBPA7XYQ1 873 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 EML1O00423 815 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 MAN1A2O60476 641 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 RHOQP17081 205 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 ALDH1B1P30837 517 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
RETREG1-206ENST00000510362 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 SH3TC1Q8TE82 1336 aa11.55□□□□□ -0.56
RETREG1-206ENST00000510362 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
RETREG1-206ENST00000510362 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.54□□□□□ -0.56
RETREG1-206ENST00000510362 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 CAPN12Q6ZSI9 719 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
RETREG1-206ENST00000510362 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
RETREG1-206ENST00000510362 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
RETREG1-206ENST00000510362 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
RETREG1-206ENST00000510362 EXOSC9Q06265 439 aaKnown RBP11.53□□□□□ -0.56
RETREG1-206ENST00000510362 WDR44Q5JSH3 913 aa11.53□□□□□ -0.56
RETREG1-206ENST00000510362 RBM17Q96I25 401 aaKnown RBP11.53□□□□□ -0.56
RETREG1-206ENST00000510362 LTBP3Q9NS15 1303 aa11.53□□□□□ -0.56
RETREG1-206ENST00000510362 E9PSI1 815 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 VAMP4O75379 141 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
RETREG1-206ENST00000510362 HOXA10P31260 410 aaPredicted RBP11.52□□□□□ -0.57
RETREG1-206ENST00000510362 HIRAP54198 1017 aaPredicted RBP11.52□□□□□ -0.57
RETREG1-206ENST00000510362 KCNA1Q09470 495 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 CCDC93Q567U6 631 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 C9orf131Q5VYM1 1079 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 KSR2Q6VAB6 950 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
RETREG1-206ENST00000510362 NFKBIEO00221 500 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 LMNB1P20700 586 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 RASSF7Q02833 373 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 NEXNQ0ZGT2 675 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 COL26A1Q96A83 441 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 VTI1AQ96AJ9 217 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 MYD88Q99836 296 aa11.51□□□□□ -0.57
RETREG1-206ENST00000510362 METTL22Q9BUU2 404 aaPredicted RBP11.51□□□□□ -0.57
RETREG1-206ENST00000510362 PI4KAP2A4QPH2 592 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 SNRPBP14678 240 aaKnown RBP11.5□□□□□ -0.57
RETREG1-206ENST00000510362 TXLNAP40222 546 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 PI4KAP1Q8N8J0 262 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 C7orf43Q8WVR3 580 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 TAOK3Q9H2K8 898 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 SEPT3Q9UH03 358 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 MAP3K2Q9Y2U5 619 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
RETREG1-206ENST00000510362 MYH3P11055 1940 aa11.49□□□□□ -0.57
RETREG1-206ENST00000510362 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
RETREG1-206ENST00000510362 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
RETREG1-206ENST00000510362 ARID4AP29374 1257 aaPredicted RBP11.49□□□□□ -0.57
RETREG1-206ENST00000510362 ZBTB38Q8NAP3 1195 aaPredicted RBP11.49□□□□□ -0.57
RETREG1-206ENST00000510362 FAM89AQ96GI7 184 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms