RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 TRAF5O00463 557 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 TM4SF1P30408 202 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
CAST-231ENST00000510245 NOGQ13253 232 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 C1orf53Q5VUE5 145 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 SAPCD2Q86UD0 394 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 SAP130Q9H0E3 1048 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 SAGE1Q9NXZ1 904 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
CAST-231ENST00000510245 ITGB4P16144 1822 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
CAST-231ENST00000510245 FGFR3P22607 806 aa10.53□□□□□ -0.72
CAST-231ENST00000510245 WHAMMQ8TF30 809 aa10.53□□□□□ -0.72
CAST-231ENST00000510245 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
CAST-231ENST00000510245 HHIPL1Q96JK4 782 aa10.53□□□□□ -0.72
CAST-231ENST00000510245 NDFIP2Q9NV92 336 aa10.53□□□□□ -0.72
CAST-231ENST00000510245 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
CAST-231ENST00000510245 ICMTO60725 284 aa10.52□□□□□ -0.73
CAST-231ENST00000510245 CELF2O95319 508 aaKnown RBP10.52□□□□□ -0.73
CAST-231ENST00000510245 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
CAST-231ENST00000510245 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
CAST-231ENST00000510245 SOGA3Q5TF21 947 aa10.52□□□□□ -0.73
CAST-231ENST00000510245 SVOPQ8N4V2 548 aa10.52□□□□□ -0.73
CAST-231ENST00000510245 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.73
CAST-231ENST00000510245 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
CAST-231ENST00000510245 SERPINB2P05120 415 aa10.51□□□□□ -0.73
CAST-231ENST00000510245 MAPTP10636 758 aaKnown RBP10.51□□□□□ -0.73
CAST-231ENST00000510245 BMP4P12644 408 aa10.51□□□□□ -0.73
CAST-231ENST00000510245 CRKLP46109 303 aaKnown RBP10.51□□□□□ -0.73
CAST-231ENST00000510245 CTBSQ01459 385 aa10.51□□□□□ -0.73
CAST-231ENST00000510245 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
CAST-231ENST00000510245 HSH2DQ96JZ2 352 aa10.51□□□□□ -0.73
CAST-231ENST00000510245 EGFL7Q9UHF1 273 aa10.51□□□□□ -0.73
CAST-231ENST00000510245 GPC6Q9Y625 555 aaPredicted RBP10.51□□□□□ -0.73
CAST-231ENST00000510245 MON2Q7Z3U7 1717 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 TRPA1O75762 1119 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 MAP2K3P46734 347 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 TNP2Q05952 138 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 NFIXQ14938 502 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 USPL1Q5W0Q7 1092 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 ZNF385CQ66K41 422 aaPredicted RBP10.5□□□□□ -0.73
CAST-231ENST00000510245 LYPD4Q6UWN0 246 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 HDGFL2Q7Z4V5 671 aaPredicted RBP10.5□□□□□ -0.73
CAST-231ENST00000510245 GLYCTKQ8IVS8 523 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 COL26A1Q96A83 441 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 ANKIB1Q9P2G1 1089 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 SPG7Q9UQ90 795 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 RTL1A6NKG5 1358 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 INSRP06213 1382 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 CARMIL3Q8ND23 1372 aa10.5□□□□□ -0.73
CAST-231ENST00000510245 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
CAST-231ENST00000510245 ECM1Q16610 540 aa10.49□□□□□ -0.73
CAST-231ENST00000510245 GPC2Q8N158 579 aa10.49□□□□□ -0.73
CAST-231ENST00000510245 ZNF408Q9H9D4 720 aa10.49□□□□□ -0.73
CAST-231ENST00000510245 HDAC9Q9UKV0 1011 aa10.49□□□□□ -0.73
CAST-231ENST00000510245 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
CAST-231ENST00000510245 CD33P20138 364 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 PDE6BP35913 854 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 MAP3K10Q02779 954 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
CAST-231ENST00000510245 SAMD5Q5TGI4 173 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 HELQQ8TDG4 1101 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 ZNF428Q96B54 188 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 RNF186Q9NXI6 227 aa10.48□□□□□ -0.73
CAST-231ENST00000510245 FER1L6Q2WGJ9 1857 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 CELA2BP08218 269 aaPredicted RBP10.47□□□□□ -0.73
CAST-231ENST00000510245 FAM157BP0CG42 384 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 COX20Q5RI15 118 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 PRPF40BQ6NWY9 871 aaKnown RBP10.47□□□□□ -0.73
CAST-231ENST00000510245 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
CAST-231ENST00000510245 ZNF280CQ8ND82 737 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 ACDQ96AP0 544 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 COG3Q96JB2 828 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
CAST-231ENST00000510245 ZNF277Q9NRM2 450 aaPredicted RBP10.47□□□□□ -0.73
CAST-231ENST00000510245 C2CD2LO14523 706 aa10.46□□□□□ -0.73
CAST-231ENST00000510245 FKBP4Q02790 459 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAST-231ENST00000510245 RTN1Q16799 776 aa10.46□□□□□ -0.73
CAST-231ENST00000510245 SYNE4Q8N205 404 aa10.46□□□□□ -0.73
CAST-231ENST00000510245 OXCT2Q9BYC2 517 aaPredicted RBP10.46□□□□□ -0.73
CAST-231ENST00000510245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAST-231ENST00000510245 MARK1Q9P0L2 795 aa10.46□□□□□ -0.73
CAST-231ENST00000510245 LRFN2Q9ULH4 789 aa10.46□□□□□ -0.73
CAST-231ENST00000510245 COL5A3P25940 1745 aaPredicted RBP10.46□□□□□ -0.74
CAST-231ENST00000510245 A0A0C4DFX4 3053 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 ZNF831Q5JPB2 1677 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 TNFRSF10BO14763 440 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 FBLN1P23142 703 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 MPSTP25325 297 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 HUNKP57058 714 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 HIF1AQ16665 826 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 CCDC93Q567U6 631 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 USP50Q70EL3 339 aaPredicted RBP10.45□□□□□ -0.74
CAST-231ENST00000510245 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
CAST-231ENST00000510245 EPS15P42566 896 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms