RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 ECM29Q5VYK3 1845 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 DDTLA6NHG4 134 aaPredicted RBP16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 PLCD1P51178 756 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 TRIM34Q9BYJ4 488 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
CYSTM1-204ENST00000509789 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 PDE4BQ07343 736 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 TRDNQ13061 729 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 AKNAD1Q5T1N1 836 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 MFSD6Q6ZSS7 791 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 KRT26Q7Z3Y9 468 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 SERPINB13Q9UIV8 391 aa16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 SCAF8Q9UPN6 1271 aaKnown RBP16.42■□□□□ 0.22
CYSTM1-204ENST00000509789 MYH1P12882 1939 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 E7EWF7 191 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 PSMA5P28066 241 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 EHD4Q9H223 541 aa16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 GPBP1L1Q9HC44 474 aaPredicted RBP16.41■□□□□ 0.22
CYSTM1-204ENST00000509789 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 NAV1Q8NEY1 1877 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 C16orf86Q6ZW13 317 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 CDC37L1Q7L3B6 337 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 KRT23Q9C075 422 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
CYSTM1-204ENST00000509789 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 FGRP09769 529 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 CDK8P49336 464 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 EVX2Q03828 476 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 IL17RAQ96F46 866 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 NEK1Q96PY6 1258 aa16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 HERC5Q9UII4 1024 aaKnown RBP16.39■□□□□ 0.21
CYSTM1-204ENST00000509789 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 POLR2AP24928 1970 aaKnown RBP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 ORC4O43929 436 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 TBC1D12O60347 775 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 HMGB1P09429 215 aaKnown RBP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 NT5C2P49902 561 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 GABPAQ06546 454 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 METTL16Q86W50 562 aaKnown RBP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 ESR2Q92731 530 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 TM6SF1Q9BZW5 370 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
CYSTM1-204ENST00000509789 ADM5C9JUS6 153 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 PRDM1O75626 825 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 YY1P25490 414 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 PRAMEF18Q5VWM3 479 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 DCAF15Q66K64 600 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 MAP1SQ66K74 1059 aaPredicted RBP16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 CDAN1Q8IWY9 1227 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 SLC44A5Q8NCS7 719 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 GLIS2Q9BZE0 524 aaPredicted RBP16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
CYSTM1-204ENST00000509789 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 NF2P35240 595 aa16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 RABEP1Q15276 862 aa16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 NEDD4P46934 1319 aa16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
CYSTM1-204ENST00000509789 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms